RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 IFNA1P01562 189 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 PMCHP20382 165 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 AKR1D1P51857 326 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 AQP4P55087 323 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 SSTP61278 116 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 MAGOHP61326 146 aaKnown RBP0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 KHDC3LQ587J8 217 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 SPANXN2Q5MJ10 180 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 ST20-AS1Q8NBB2 130 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 OR10AG1Q8NH19 301 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 GPX8Q8TED1 209 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 FAM167A-AS1Q96KT0 104 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 FAM210AQ96ND0 272 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 GGACTQ9BVM4 153 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 LAMTOR3Q9UHA4 124 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 CSDC2Q9Y534 153 aaKnown RBP0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 PIGBOS1A0A0B4J2F0 54 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 I3L3M4 83 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 RPL29P47914 159 aaKnown RBP0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 SULT1A1P50225 295 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 TAS2R30P59541 319 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 CXCL6P80162 114 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 FLI1Q01543 452 aaPredicted RBP0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 ZNF345Q14585 488 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 C5orf47Q569G3 176 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 MIR17HGQ75NE6 70 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 CROCCP2Q86T23 111 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 MND1Q9BWT6 205 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 PSENENQ9NZ42 101 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 KCNIP3Q9Y2W7 256 aa0.65□□□□□ -2.31
TRAV1-1-201ENST00000542354 MUC21A0A140T8X8 626 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 IGSF23A1L1A6 192 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 C5orf52A6NGY3 159 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 MYL12BO14950 172 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 METTL15P1P0C7V9 234 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 RAB3BP20337 219 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 SPRR1AP35321 89 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 RAB5BP61020 215 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 RAB14P61106 215 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 GNG5P63218 68 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 UBE2L3P68036 154 aaKnown RBP0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 CSAG1Q6PB30 78 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 TMEM91Q6ZNR0 172 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 SNX29P2Q8IUI4 249 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 LINC01561Q8N1V8 128 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 PYDC1Q8WXC3 89 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 Q9BRP9 147 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 GABARAPL1Q9H0R8 117 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 ANAPC10Q9UM13 185 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 C14orf166Q9Y224 244 aaKnown RBP0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 ORC6Q9Y5N6 252 aa0.64□□□□□ -2.31
TRAV1-1-201ENST00000542354 TRAV1-2A0A0B4J238 106 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 XKRY2A2RUG3 117 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 C7orf77A4D0Y5 90 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 SDHAF1A6NFY7 115 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 PTGES3LE9PB15 166 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 SH2D1AO60880 128 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 RAB5AP20339 215 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 CALB2P22676 271 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 CRIP1P50238 77 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 S100A12P80511 92 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 Q6ZN92 141 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 FA2HQ7L5A8 372 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 AQP12AQ8IXF9 295 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 Q8IZM0 81 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 DEFB107AQ8IZN7 70 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 MT1LQ93083 61 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 KCNQ1DNQ9H478 68 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 C10orf95Q9H7T3 257 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 S100A14Q9HCY8 104 aa0.63□□□□□ -2.31
TRAV1-1-201ENST00000542354 CXCL1P09341 107 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 ANXA3P12429 323 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 SPRR1BP22528 89 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 MYL9P24844 172 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 CXCL5P42830 114 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 FHITP49789 147 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 TAS2R45P59539 299 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 GCSAMLQ5JQS6 135 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 TMEM14EPQ6UXP3 125 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 Q6ZUT4 128 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 COX8CQ7Z4L0 72 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 C5orf17Q8NAS9 161 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 ANP32BQ92688 251 aaKnown RBP0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 SMIM8Q96KF7 97 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 ACOT13Q9NPJ3 140 aa0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 LSM2Q9Y333 95 aaKnown RBP0.62□□□□□ -2.31
TRAV1-1-201ENST00000542354 A0A1B0GWB2 263 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 A8MUN3 132 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 PTMSP20962 102 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 HBBP68871 147 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 JOSD1Q15040 202 aaPredicted RBP0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 SPHARQ15513 63 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 RNASE10Q5GAN6 216 aaKnown RBP0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 MZT2BQ6NZ67 158 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 TEX261Q6UWH6 196 aa0.61□□□□□ -2.31
TRAV1-1-201ENST00000542354 APH1BQ8WW43 257 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms