RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 H0YGX0 51 aa11.5□□□□□ -0.57
VARS2-212ENST00000542001 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
VARS2-212ENST00000542001 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
VARS2-212ENST00000542001 CCL18P55774 89 aa11.49□□□□□ -0.57
VARS2-212ENST00000542001 DSCR8Q96T75 97 aa11.49□□□□□ -0.57
VARS2-212ENST00000542001 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
VARS2-212ENST00000542001 LST1O00453 97 aa11.48□□□□□ -0.57
VARS2-212ENST00000542001 NTM-AS1Q6ZSK4 140 aa11.48□□□□□ -0.57
VARS2-212ENST00000542001 C6orf99Q4VX62 202 aa11.48□□□□□ -0.57
VARS2-212ENST00000542001 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
VARS2-212ENST00000542001 BRI3O95415 125 aa11.47□□□□□ -0.57
VARS2-212ENST00000542001 HILS1P60008 231 aa11.47□□□□□ -0.57
VARS2-212ENST00000542001 RETNQ9HD89 108 aa11.47□□□□□ -0.57
VARS2-212ENST00000542001 A0A1B0GX51 115 aa11.46□□□□□ -0.57
VARS2-212ENST00000542001 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.57
VARS2-212ENST00000542001 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.57
VARS2-212ENST00000542001 IGLV1-51P01701 117 aa11.46□□□□□ -0.57
VARS2-212ENST00000542001 LINC01546A6NGU7 62 aa11.45□□□□□ -0.58
VARS2-212ENST00000542001 Q8N2B8 174 aa11.45□□□□□ -0.58
VARS2-212ENST00000542001 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
VARS2-212ENST00000542001 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
VARS2-212ENST00000542001 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
VARS2-212ENST00000542001 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.44□□□□□ -0.58
VARS2-212ENST00000542001 FHL2Q14192 279 aa11.43□□□□□ -0.58
VARS2-212ENST00000542001 CELSR1Q9NYQ6 3014 aa11.43□□□□□ -0.58
VARS2-212ENST00000542001 A8MTW9 85 aa11.43□□□□□ -0.58
VARS2-212ENST00000542001 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
VARS2-212ENST00000542001 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
VARS2-212ENST00000542001 TRAV23DV6A0A075B6W5 121 aa11.41□□□□□ -0.58
VARS2-212ENST00000542001 IBA57-AS1B1ANH7 110 aa11.41□□□□□ -0.58
VARS2-212ENST00000542001 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
VARS2-212ENST00000542001 Q8N3U1 123 aa11.41□□□□□ -0.58
VARS2-212ENST00000542001 TRACP01848 142 aa11.41□□□□□ -0.58
VARS2-212ENST00000542001 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
VARS2-212ENST00000542001 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
VARS2-212ENST00000542001 C6orf223Q8N319 242 aa11.39□□□□□ -0.59
VARS2-212ENST00000542001 GHRHP01286 108 aa11.39□□□□□ -0.59
VARS2-212ENST00000542001 ACYP1P07311 99 aa11.38□□□□□ -0.59
VARS2-212ENST00000542001 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
VARS2-212ENST00000542001 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
VARS2-212ENST00000542001 A0A087WYN8 130 aa11.38□□□□□ -0.59
VARS2-212ENST00000542001 UBE2BP63146 152 aa11.38□□□□□ -0.59
VARS2-212ENST00000542001 IGHV4-30-4P0DP06 118 aa11.37□□□□□ -0.59
VARS2-212ENST00000542001 TIMM17BO60830 172 aa11.37□□□□□ -0.59
VARS2-212ENST00000542001 SOSTDC1Q6X4U4 206 aa11.37□□□□□ -0.59
VARS2-212ENST00000542001 LYRM9A8MSI8 78 aa11.36□□□□□ -0.59
VARS2-212ENST00000542001 RBM3P98179 157 aaKnown RBP11.36□□□□□ -0.59
VARS2-212ENST00000542001 LINC00643Q86TS7 51 aa11.36□□□□□ -0.59
VARS2-212ENST00000542001 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
VARS2-212ENST00000542001 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 Q6ZQY7 126 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
VARS2-212ENST00000542001 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
VARS2-212ENST00000542001 CD164L2Q6UWJ8 174 aa11.34□□□□□ -0.59
VARS2-212ENST00000542001 CYSRT1A8MQ03 144 aa11.34□□□□□ -0.59
VARS2-212ENST00000542001 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
VARS2-212ENST00000542001 A0A087WVE0 104 aa11.34□□□□□ -0.59
VARS2-212ENST00000542001 CXCL5P42830 114 aa11.33□□□□□ -0.6
VARS2-212ENST00000542001 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
VARS2-212ENST00000542001 SMIM9A6NGZ8 99 aa11.32□□□□□ -0.6
VARS2-212ENST00000542001 F8WEM9 126 aa11.32□□□□□ -0.6
VARS2-212ENST00000542001 A0A096LNI7 61 aa11.32□□□□□ -0.6
VARS2-212ENST00000542001 ETDCA0A1B0GVM5 59 aa11.32□□□□□ -0.6
VARS2-212ENST00000542001 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
VARS2-212ENST00000542001 ENHOQ6UWT2 76 aa11.32□□□□□ -0.6
VARS2-212ENST00000542001 A0A087WZ39 114 aa11.31□□□□□ -0.6
VARS2-212ENST00000542001 KLK9Q2XQG4 91 aa11.31□□□□□ -0.6
VARS2-212ENST00000542001 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
VARS2-212ENST00000542001 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
VARS2-212ENST00000542001 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
VARS2-212ENST00000542001 SVIPQ8NHG7 77 aa11.29□□□□□ -0.6
VARS2-212ENST00000542001 J3KT08 172 aa11.29□□□□□ -0.6
VARS2-212ENST00000542001 M0QXV9 152 aa11.29□□□□□ -0.6
VARS2-212ENST00000542001 MIFP14174 115 aa11.29□□□□□ -0.6
VARS2-212ENST00000542001 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
VARS2-212ENST00000542001 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
VARS2-212ENST00000542001 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
VARS2-212ENST00000542001 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
VARS2-212ENST00000542001 COX7BP24311 80 aa11.28□□□□□ -0.6
VARS2-212ENST00000542001 Q6ZTC4 211 aa11.28□□□□□ -0.6
VARS2-212ENST00000542001 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.61
VARS2-212ENST00000542001 A0A096LNT2 108 aa11.26□□□□□ -0.61
VARS2-212ENST00000542001 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
VARS2-212ENST00000542001 C20orf197Q8N268 126 aa11.26□□□□□ -0.61
VARS2-212ENST00000542001 MXRA5Q9NR99 2828 aa11.26□□□□□ -0.61
VARS2-212ENST00000542001 CSDC2Q9Y534 153 aaKnown RBP11.26□□□□□ -0.61
VARS2-212ENST00000542001 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
VARS2-212ENST00000542001 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
VARS2-212ENST00000542001 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
VARS2-212ENST00000542001 ATOX1O00244 68 aa11.25□□□□□ -0.61
VARS2-212ENST00000542001 FSHBP01225 129 aa11.25□□□□□ -0.61
VARS2-212ENST00000542001 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 FHL3Q13643 280 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 NREPQ16612 68 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 WFDC10BQ8IUB3 73 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 APCP25054 2843 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 Q8IZM0 81 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms