RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CXCL5P42830 114 aa9.39□□□□□ -0.91
SMG6-203ENST00000536871 CD164L2Q6UWJ8 174 aa9.39□□□□□ -0.91
SMG6-203ENST00000536871 Q8IZM0 81 aa9.39□□□□□ -0.91
SMG6-203ENST00000536871 C11orf68Q9H3H3 251 aaKnown RBP9.39□□□□□ -0.91
SMG6-203ENST00000536871 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
SMG6-203ENST00000536871 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
SMG6-203ENST00000536871 H7C2G1 150 aa9.38□□□□□ -0.91
SMG6-203ENST00000536871 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
SMG6-203ENST00000536871 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 TRBV10-2A0A0K0K1G8 114 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 C9JAW5 83 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 H3BT86 120 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
SMG6-203ENST00000536871 TRIAP1O43715 76 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 NPC2P61916 151 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 A0A096LPF7 62 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 DAND5Q8N907 189 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 C15orf53Q8NAA6 179 aa9.36□□□□□ -0.91
SMG6-203ENST00000536871 COX7A2LO14548 114 aa9.35□□□□□ -0.91
SMG6-203ENST00000536871 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
SMG6-203ENST00000536871 XCL1P47992 114 aa9.35□□□□□ -0.91
SMG6-203ENST00000536871 KRTAP10-11P60412 298 aa9.35□□□□□ -0.91
SMG6-203ENST00000536871 REG3AQ06141 175 aa9.35□□□□□ -0.91
SMG6-203ENST00000536871 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
SMG6-203ENST00000536871 C5orf47Q569G3 176 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 MUC7Q8TAX7 377 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
SMG6-203ENST00000536871 A0A1B0GX51 115 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 ACYP1P07311 99 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 HTN3P15516 51 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 LINC00158P58513 81 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 MIR7-3HGQ8N6C7 128 aa9.34□□□□□ -0.91
SMG6-203ENST00000536871 COX17Q14061 63 aa9.33□□□□□ -0.92
SMG6-203ENST00000536871 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
SMG6-203ENST00000536871 A0A0U1RRA0 63 aa9.32□□□□□ -0.92
SMG6-203ENST00000536871 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
SMG6-203ENST00000536871 CRPP02741 224 aa9.32□□□□□ -0.92
SMG6-203ENST00000536871 MALP21145 153 aa9.32□□□□□ -0.92
SMG6-203ENST00000536871 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
SMG6-203ENST00000536871 LST1O00453 97 aa9.31□□□□□ -0.92
SMG6-203ENST00000536871 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
SMG6-203ENST00000536871 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
SMG6-203ENST00000536871 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
SMG6-203ENST00000536871 RPS28P62857 69 aaKnown RBP9.3□□□□□ -0.92
SMG6-203ENST00000536871 LYPD5Q6UWN5 251 aa9.3□□□□□ -0.92
SMG6-203ENST00000536871 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
SMG6-203ENST00000536871 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
SMG6-203ENST00000536871 F8P00451 2351 aa9.28□□□□□ -0.92
SMG6-203ENST00000536871 UQCRQO14949 82 aa9.28□□□□□ -0.92
SMG6-203ENST00000536871 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
SMG6-203ENST00000536871 CLPSL2Q6UWE3 100 aa9.28□□□□□ -0.92
SMG6-203ENST00000536871 J3KT08 172 aa9.27□□□□□ -0.93
SMG6-203ENST00000536871 TRACP01848 142 aa9.27□□□□□ -0.93
SMG6-203ENST00000536871 CCL18P55774 89 aa9.27□□□□□ -0.93
SMG6-203ENST00000536871 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
SMG6-203ENST00000536871 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.93
SMG6-203ENST00000536871 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
SMG6-203ENST00000536871 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
SMG6-203ENST00000536871 ATRQ13535 2644 aa9.26□□□□□ -0.93
SMG6-203ENST00000536871 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
SMG6-203ENST00000536871 NDUFC2O95298 119 aa9.25□□□□□ -0.93
SMG6-203ENST00000536871 PFN2P35080 140 aa9.25□□□□□ -0.93
SMG6-203ENST00000536871 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
SMG6-203ENST00000536871 H0YGX0 51 aa9.25□□□□□ -0.93
SMG6-203ENST00000536871 Q6ZTC4 211 aa9.24□□□□□ -0.93
SMG6-203ENST00000536871 C11orf45Q8TAV5 145 aa9.24□□□□□ -0.93
SMG6-203ENST00000536871 RETNQ9HD89 108 aa9.24□□□□□ -0.93
SMG6-203ENST00000536871 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
SMG6-203ENST00000536871 CYSRT1A8MQ03 144 aa9.23□□□□□ -0.93
SMG6-203ENST00000536871 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
SMG6-203ENST00000536871 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
SMG6-203ENST00000536871 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
SMG6-203ENST00000536871 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
SMG6-203ENST00000536871 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
SMG6-203ENST00000536871 C9orf153Q5TBE3 101 aa9.22□□□□□ -0.93
SMG6-203ENST00000536871 LINC00643Q86TS7 51 aa9.22□□□□□ -0.93
SMG6-203ENST00000536871 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
SMG6-203ENST00000536871 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.93
SMG6-203ENST00000536871 A0A0J9YWU9 116 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 ENHOQ6UWT2 76 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.93
SMG6-203ENST00000536871 VWFP04275 2813 aa9.21□□□□□ -0.94
SMG6-203ENST00000536871 F8WDY8 70 aa9.2□□□□□ -0.94
SMG6-203ENST00000536871 CRYGAP11844 174 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 Q8N3U1 123 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 TRAV10A0A0B4J240 114 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SMG6-203ENST00000536871 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
SMG6-203ENST00000536871 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
SMG6-203ENST00000536871 COX7CP15954 63 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms