RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC4-213ENST00000533149 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
TRAPPC4-213ENST00000533149 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
TRAPPC4-213ENST00000533149 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
TRAPPC4-213ENST00000533149 HERVK_113P63121 156 aa7.4□□□□□ -1.22
TRAPPC4-213ENST00000533149 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
TRAPPC4-213ENST00000533149 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
TRAPPC4-213ENST00000533149 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC4-213ENST00000533149 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 CRPP02741 224 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 XCL1P47992 114 aa7.38□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 H3BRM9 83 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 HERVK_113P61574 105 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 MIAQ16674 131 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 CD164L2Q6UWJ8 174 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 TM2D2Q9BX73 214 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 Q9HAA7 133 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGKV2D-26A0A0A0MRZ7 120 aa7.36□□□□□ -1.23
TRAPPC4-213ENST00000533149 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
TRAPPC4-213ENST00000533149 E9PLD3 99 aa7.36□□□□□ -1.23
TRAPPC4-213ENST00000533149 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
TRAPPC4-213ENST00000533149 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
TRAPPC4-213ENST00000533149 A0A087WZ39 114 aa7.35□□□□□ -1.23
TRAPPC4-213ENST00000533149 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
TRAPPC4-213ENST00000533149 FOXI1Q12951 378 aa7.35□□□□□ -1.23
TRAPPC4-213ENST00000533149 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
TRAPPC4-213ENST00000533149 LRP2P98164 4655 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGHV1-58A0A0C4DH39 117 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 COX7A2LO14548 114 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 LEPROTO15243 131 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 NMUP48645 174 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 PLEKHB2Q96CS7 222 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
TRAPPC4-213ENST00000533149 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 IGKV2D-24A0A075B6R9 120 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 PCP2Q8IVA1 136 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
TRAPPC4-213ENST00000533149 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 IGLV5-39A0A0G2JS06 123 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 J3QQQ9 107 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 COX8AP10176 69 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 WFDC2Q14508 124 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 Q6ZRU5 148 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 TTTY13Q9BZ97 58 aa7.32□□□□□ -1.24
TRAPPC4-213ENST00000533149 LGALS3P17931 250 aaKnown RBP7.31□□□□□ -1.24
TRAPPC4-213ENST00000533149 MALP21145 153 aa7.31□□□□□ -1.24
TRAPPC4-213ENST00000533149 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
TRAPPC4-213ENST00000533149 RMI2Q96E14 147 aa7.31□□□□□ -1.24
TRAPPC4-213ENST00000533149 LECT2O14960 151 aa7.3□□□□□ -1.24
TRAPPC4-213ENST00000533149 SLC25A34Q6PIV7 304 aa7.3□□□□□ -1.24
TRAPPC4-213ENST00000533149 MIEN1Q9BRT3 115 aa7.3□□□□□ -1.24
TRAPPC4-213ENST00000533149 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 TSTD3H0UI37 97 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 DLEU1O43261 78 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 APOMO95445 188 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 BOD1L2Q8IYS8 172 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 UQCR10Q9UDW1 63 aa7.29□□□□□ -1.24
TRAPPC4-213ENST00000533149 ZNF815PA8K554 130 aa7.28□□□□□ -1.24
TRAPPC4-213ENST00000533149 ORAOV1Q8WV07 137 aa7.28□□□□□ -1.24
TRAPPC4-213ENST00000533149 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
TRAPPC4-213ENST00000533149 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
TRAPPC4-213ENST00000533149 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
TRAPPC4-213ENST00000533149 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.24
TRAPPC4-213ENST00000533149 KIAA0087Q14695 138 aa7.27□□□□□ -1.24
TRAPPC4-213ENST00000533149 C6orf226Q5I0X4 101 aa7.27□□□□□ -1.24
TRAPPC4-213ENST00000533149 PCP4L1A6NKN8 68 aa7.27□□□□□ -1.25
TRAPPC4-213ENST00000533149 PRSS2P07478 247 aa7.27□□□□□ -1.25
TRAPPC4-213ENST00000533149 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
TRAPPC4-213ENST00000533149 Q8IZM0 81 aa7.27□□□□□ -1.25
TRAPPC4-213ENST00000533149 PKHD1L1Q86WI1 4243 aa7.26□□□□□ -1.25
TRAPPC4-213ENST00000533149 NDUFA1O15239 70 aa7.26□□□□□ -1.25
TRAPPC4-213ENST00000533149 DDTP30046 118 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 SPAG11BQ08648 103 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 C2orf91Q6ZV80 131 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 LINC00526Q96FQ7 95 aa7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC4-213ENST00000533149 A0A0J9YXY3 114 aa7.24□□□□□ -1.25
TRAPPC4-213ENST00000533149 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms