RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 NDUFA6P56556 154 aa10.59□□□□□ -0.71
NR1H3-233ENST00000531660 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
NR1H3-233ENST00000531660 C10orf25Q5T742 122 aa10.59□□□□□ -0.71
NR1H3-233ENST00000531660 C6orf48Q9UBA6 75 aa10.59□□□□□ -0.71
NR1H3-233ENST00000531660 TINCRA0A1B0GVN0 87 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 PRSS2P07478 247 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 PMVKQ15126 192 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 Q8IZM0 81 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 PACRGQ96M98 296 aaPredicted RBP10.58□□□□□ -0.72
NR1H3-233ENST00000531660 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
NR1H3-233ENST00000531660 OXTP01178 125 aa10.57□□□□□ -0.72
NR1H3-233ENST00000531660 TRGC2P03986 189 aa10.57□□□□□ -0.72
NR1H3-233ENST00000531660 PCP4L1A6NKN8 68 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 J3QL48 77 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
NR1H3-233ENST00000531660 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 A0A096LNJ9 63 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 HBDP02042 147 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 HNRNPA3P51991 378 aaKnown RBP10.55□□□□□ -0.72
NR1H3-233ENST00000531660 CKS1BP61024 79 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
NR1H3-233ENST00000531660 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 LINC00469Q8N7U9 141 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
NR1H3-233ENST00000531660 A0A1W2PNN7 141 aa10.54□□□□□ -0.72
NR1H3-233ENST00000531660 PRR3P79522 188 aaKnown RBP10.54□□□□□ -0.72
NR1H3-233ENST00000531660 Q6ZRP5 223 aa10.54□□□□□ -0.72
NR1H3-233ENST00000531660 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
NR1H3-233ENST00000531660 CXCL5P42830 114 aa10.53□□□□□ -0.72
NR1H3-233ENST00000531660 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
NR1H3-233ENST00000531660 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.73
NR1H3-233ENST00000531660 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
NR1H3-233ENST00000531660 ATP5LO75964 103 aa10.52□□□□□ -0.73
NR1H3-233ENST00000531660 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
NR1H3-233ENST00000531660 COA6Q5JTJ3 125 aaKnown RBP10.51□□□□□ -0.73
NR1H3-233ENST00000531660 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
NR1H3-233ENST00000531660 F8VRH5 84 aa10.5□□□□□ -0.73
NR1H3-233ENST00000531660 H3BRM9 83 aa10.5□□□□□ -0.73
NR1H3-233ENST00000531660 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
NR1H3-233ENST00000531660 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
NR1H3-233ENST00000531660 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
NR1H3-233ENST00000531660 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
NR1H3-233ENST00000531660 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
NR1H3-233ENST00000531660 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
NR1H3-233ENST00000531660 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
NR1H3-233ENST00000531660 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
NR1H3-233ENST00000531660 FABP4P15090 132 aa10.45□□□□□ -0.74
NR1H3-233ENST00000531660 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
NR1H3-233ENST00000531660 BAGE3Q86Y29 109 aa10.45□□□□□ -0.74
NR1H3-233ENST00000531660 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
NR1H3-233ENST00000531660 FAM168BA1KXE4 195 aa10.44□□□□□ -0.74
NR1H3-233ENST00000531660 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
NR1H3-233ENST00000531660 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
NR1H3-233ENST00000531660 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
NR1H3-233ENST00000531660 ODF1Q14990 250 aa10.43□□□□□ -0.74
NR1H3-233ENST00000531660 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
NR1H3-233ENST00000531660 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
NR1H3-233ENST00000531660 PSORS1C2Q9UIG4 136 aa10.43□□□□□ -0.74
NR1H3-233ENST00000531660 HSBP1O75506 76 aa10.42□□□□□ -0.74
NR1H3-233ENST00000531660 SRSF9Q13242 221 aaKnown RBP eCLIP10.42□□□□□ -0.74
NR1H3-233ENST00000531660 IFI27L1Q96BM0 104 aa10.42□□□□□ -0.74
NR1H3-233ENST00000531660 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
NR1H3-233ENST00000531660 M0QXV9 152 aa10.41□□□□□ -0.74
NR1H3-233ENST00000531660 CTAG1AP78358 180 aa10.41□□□□□ -0.74
NR1H3-233ENST00000531660 JOSD1Q15040 202 aaPredicted RBP10.41□□□□□ -0.74
NR1H3-233ENST00000531660 PYY3Q5JQD4 70 aa10.41□□□□□ -0.74
NR1H3-233ENST00000531660 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
NR1H3-233ENST00000531660 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
NR1H3-233ENST00000531660 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
NR1H3-233ENST00000531660 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
NR1H3-233ENST00000531660 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
NR1H3-233ENST00000531660 TMEM170BQ5T4T1 132 aa10.38□□□□□ -0.75
NR1H3-233ENST00000531660 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
NR1H3-233ENST00000531660 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
NR1H3-233ENST00000531660 UBE2BP63146 152 aa10.37□□□□□ -0.75
NR1H3-233ENST00000531660 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
NR1H3-233ENST00000531660 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
NR1H3-233ENST00000531660 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-233ENST00000531660 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
NR1H3-233ENST00000531660 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
NR1H3-233ENST00000531660 SERF1AO75920 110 aa10.35□□□□□ -0.75
NR1H3-233ENST00000531660 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
NR1H3-233ENST00000531660 PLA2G2DQ9UNK4 145 aa10.35□□□□□ -0.75
NR1H3-233ENST00000531660 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
NR1H3-233ENST00000531660 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
NR1H3-233ENST00000531660 COX17Q14061 63 aa10.34□□□□□ -0.75
NR1H3-233ENST00000531660 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms