RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 LINC00469Q8N7U9 141 aa10.84□□□□□ -0.67
USP35-202ENST00000528910 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
USP35-202ENST00000528910 A0A1W2PNN7 141 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 SMIM1B2RUZ4 78 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 PRSS2P07478 247 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 PRR3P79522 188 aaKnown RBP10.83□□□□□ -0.68
USP35-202ENST00000528910 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
USP35-202ENST00000528910 PDZD11Q5EBL8 140 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 Q6ZRP5 223 aa10.83□□□□□ -0.68
USP35-202ENST00000528910 PMCHL1Q16048 86 aa10.82□□□□□ -0.68
USP35-202ENST00000528910 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
USP35-202ENST00000528910 IGLC3P0DOY3 106 aa10.81□□□□□ -0.68
USP35-202ENST00000528910 CXCL5P42830 114 aa10.81□□□□□ -0.68
USP35-202ENST00000528910 CHCHD1Q96BP2 118 aaKnown RBP10.81□□□□□ -0.68
USP35-202ENST00000528910 NDUFC2-KCTD14E9PQ53 114 aa10.8□□□□□ -0.68
USP35-202ENST00000528910 ATP5LO75964 103 aa10.8□□□□□ -0.68
USP35-202ENST00000528910 OXTP01178 125 aa10.8□□□□□ -0.68
USP35-202ENST00000528910 CKS1BP61024 79 aa10.8□□□□□ -0.68
USP35-202ENST00000528910 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
USP35-202ENST00000528910 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
USP35-202ENST00000528910 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
USP35-202ENST00000528910 F8VRH5 84 aa10.78□□□□□ -0.68
USP35-202ENST00000528910 J3QL48 77 aa10.78□□□□□ -0.68
USP35-202ENST00000528910 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
USP35-202ENST00000528910 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
USP35-202ENST00000528910 H3BRM9 83 aa10.76□□□□□ -0.69
USP35-202ENST00000528910 TRGC2P03986 189 aa10.76□□□□□ -0.69
USP35-202ENST00000528910 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
USP35-202ENST00000528910 COX7B2Q8TF08 81 aa10.76□□□□□ -0.69
USP35-202ENST00000528910 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
USP35-202ENST00000528910 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
USP35-202ENST00000528910 KRTAP7-1Q8IUC3 87 aa10.75□□□□□ -0.69
USP35-202ENST00000528910 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
USP35-202ENST00000528910 NDUFA6P56556 154 aa10.74□□□□□ -0.69
USP35-202ENST00000528910 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
USP35-202ENST00000528910 PHF5AQ7RTV0 110 aaKnown RBP10.74□□□□□ -0.69
USP35-202ENST00000528910 COLCA2A8K830 154 aa10.73□□□□□ -0.69
USP35-202ENST00000528910 FAM19A5Q7Z5A7 132 aaPredicted RBP10.73□□□□□ -0.69
USP35-202ENST00000528910 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
USP35-202ENST00000528910 HSBP1O75506 76 aa10.72□□□□□ -0.69
USP35-202ENST00000528910 LINC00310P59036 64 aa10.72□□□□□ -0.69
USP35-202ENST00000528910 BAGE3Q86Y29 109 aa10.72□□□□□ -0.69
USP35-202ENST00000528910 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.69
USP35-202ENST00000528910 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
USP35-202ENST00000528910 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
USP35-202ENST00000528910 M0QXV9 152 aa10.7□□□□□ -0.7
USP35-202ENST00000528910 ODF1Q14990 250 aa10.7□□□□□ -0.7
USP35-202ENST00000528910 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
USP35-202ENST00000528910 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
USP35-202ENST00000528910 SERF1AO75920 110 aa10.68□□□□□ -0.7
USP35-202ENST00000528910 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP35-202ENST00000528910 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
USP35-202ENST00000528910 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
USP35-202ENST00000528910 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
USP35-202ENST00000528910 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
USP35-202ENST00000528910 TMEM170BQ5T4T1 132 aa10.66□□□□□ -0.7
USP35-202ENST00000528910 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
USP35-202ENST00000528910 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
USP35-202ENST00000528910 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
USP35-202ENST00000528910 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
USP35-202ENST00000528910 SCO1O75880 301 aa10.63□□□□□ -0.71
USP35-202ENST00000528910 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
USP35-202ENST00000528910 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
USP35-202ENST00000528910 NUPR1O60356 82 aa10.62□□□□□ -0.71
USP35-202ENST00000528910 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
USP35-202ENST00000528910 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
USP35-202ENST00000528910 UBE2BP63146 152 aa10.61□□□□□ -0.71
USP35-202ENST00000528910 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
USP35-202ENST00000528910 LINC01600Q96MT4 127 aa10.61□□□□□ -0.71
USP35-202ENST00000528910 ERG28Q9UKR5 140 aa10.61□□□□□ -0.71
USP35-202ENST00000528910 C22orf24Q9Y442 160 aa10.61□□□□□ -0.71
USP35-202ENST00000528910 REG3GQ6UW15 175 aa10.6□□□□□ -0.71
USP35-202ENST00000528910 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
USP35-202ENST00000528910 COX17Q14061 63 aa10.59□□□□□ -0.71
USP35-202ENST00000528910 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
USP35-202ENST00000528910 LBHQ53QV2 105 aaPredicted RBP10.58□□□□□ -0.72
USP35-202ENST00000528910 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BJP06899 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BOP23527 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BBP33778 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 PFN2P35080 140 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BDP58876 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BCP62807 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST2H2BEQ16778 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BHQ93079 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BNQ99877 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 HIST1H2BMQ99879 126 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 TNXBP22105 4242 aa10.57□□□□□ -0.72
USP35-202ENST00000528910 H0Y8G0 127 aa10.55□□□□□ -0.72
USP35-202ENST00000528910 PLNP26678 52 aa10.55□□□□□ -0.72
USP35-202ENST00000528910 DIRC1Q969H9 104 aa10.55□□□□□ -0.72
USP35-202ENST00000528910 SND1-IT1Q9HBX3 110 aa10.55□□□□□ -0.72
USP35-202ENST00000528910 FABP4P15090 132 aa10.54□□□□□ -0.72
USP35-202ENST00000528910 H0Y9J4 135 aa10.53□□□□□ -0.72
USP35-202ENST00000528910 VPREB1P12018 145 aa10.52□□□□□ -0.73
USP35-202ENST00000528910 LINC00167Q96N53 147 aa10.52□□□□□ -0.73
USP35-202ENST00000528910 DPM2O94777 84 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms