RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
CAPN1-213ENST00000527897 MT1HL1P0DM35 61 aa9.61□□□□□ -0.87
CAPN1-213ENST00000527897 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
CAPN1-213ENST00000527897 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
CAPN1-213ENST00000527897 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
CAPN1-213ENST00000527897 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
CAPN1-213ENST00000527897 C1orf137Q5JT78 98 aa9.6□□□□□ -0.87
CAPN1-213ENST00000527897 Q8IZM0 81 aa9.6□□□□□ -0.87
CAPN1-213ENST00000527897 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
CAPN1-213ENST00000527897 SNAPINO95295 136 aa9.59□□□□□ -0.87
CAPN1-213ENST00000527897 SVBPQ8N300 66 aa9.59□□□□□ -0.87
CAPN1-213ENST00000527897 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
CAPN1-213ENST00000527897 NDUFA6P56556 154 aa9.58□□□□□ -0.88
CAPN1-213ENST00000527897 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
CAPN1-213ENST00000527897 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
CAPN1-213ENST00000527897 M0QXV9 152 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 UBE2BP63146 152 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 PMVKQ15126 192 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 PLA2G2DQ9UNK4 145 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 HMCN2Q8NDA2 5059 aa9.57□□□□□ -0.88
CAPN1-213ENST00000527897 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
CAPN1-213ENST00000527897 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
CAPN1-213ENST00000527897 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
CAPN1-213ENST00000527897 PMCHL1Q16048 86 aa9.56□□□□□ -0.88
CAPN1-213ENST00000527897 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
CAPN1-213ENST00000527897 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
CAPN1-213ENST00000527897 F8VRH5 84 aa9.55□□□□□ -0.88
CAPN1-213ENST00000527897 LINC00614P0C842 121 aa9.55□□□□□ -0.88
CAPN1-213ENST00000527897 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
CAPN1-213ENST00000527897 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
CAPN1-213ENST00000527897 CXCL5P42830 114 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 TNXBP22105 4242 aa9.54□□□□□ -0.88
CAPN1-213ENST00000527897 HBDP02042 147 aa9.53□□□□□ -0.88
CAPN1-213ENST00000527897 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
CAPN1-213ENST00000527897 A0A096LNJ9 63 aa9.52□□□□□ -0.89
CAPN1-213ENST00000527897 H3BRM9 83 aa9.52□□□□□ -0.89
CAPN1-213ENST00000527897 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
CAPN1-213ENST00000527897 RAB5BP61020 215 aa9.51□□□□□ -0.89
CAPN1-213ENST00000527897 ODF1Q14990 250 aa9.51□□□□□ -0.89
CAPN1-213ENST00000527897 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
CAPN1-213ENST00000527897 C22orf24Q9Y442 160 aa9.49□□□□□ -0.89
CAPN1-213ENST00000527897 ATP5LO75964 103 aa9.48□□□□□ -0.89
CAPN1-213ENST00000527897 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
CAPN1-213ENST00000527897 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
CAPN1-213ENST00000527897 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-213ENST00000527897 BAGE3Q86Y29 109 aa9.47□□□□□ -0.89
CAPN1-213ENST00000527897 YPEL4Q96NS1 127 aa9.47□□□□□ -0.89
CAPN1-213ENST00000527897 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
CAPN1-213ENST00000527897 PFN2P35080 140 aa9.45□□□□□ -0.9
CAPN1-213ENST00000527897 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
CAPN1-213ENST00000527897 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-213ENST00000527897 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
CAPN1-213ENST00000527897 H0Y9J4 135 aa9.44□□□□□ -0.9
CAPN1-213ENST00000527897 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
CAPN1-213ENST00000527897 GAGE10A6NGK3 116 aa9.43□□□□□ -0.9
CAPN1-213ENST00000527897 SLC7A5P1Q8MH63 180 aa9.43□□□□□ -0.9
CAPN1-213ENST00000527897 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
CAPN1-213ENST00000527897 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
CAPN1-213ENST00000527897 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
CAPN1-213ENST00000527897 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-213ENST00000527897 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
CAPN1-213ENST00000527897 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
CAPN1-213ENST00000527897 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
CAPN1-213ENST00000527897 IFI27L1Q96BM0 104 aa9.41□□□□□ -0.9
CAPN1-213ENST00000527897 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
CAPN1-213ENST00000527897 NUPR1O60356 82 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 HSBP1O75506 76 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 TRGC2P03986 189 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
CAPN1-213ENST00000527897 H0Y8G0 127 aa9.39□□□□□ -0.91
CAPN1-213ENST00000527897 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
CAPN1-213ENST00000527897 ZNF861PO60384 105 aa9.37□□□□□ -0.91
CAPN1-213ENST00000527897 SCO1O75880 301 aa9.37□□□□□ -0.91
CAPN1-213ENST00000527897 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
CAPN1-213ENST00000527897 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
CAPN1-213ENST00000527897 BCE1O60756 84 aa9.35□□□□□ -0.91
CAPN1-213ENST00000527897 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 LINC00158P58513 81 aa9.34□□□□□ -0.91
CAPN1-213ENST00000527897 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
CAPN1-213ENST00000527897 SERF1AO75920 110 aa9.33□□□□□ -0.92
CAPN1-213ENST00000527897 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
CAPN1-213ENST00000527897 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
CAPN1-213ENST00000527897 COX17Q14061 63 aa9.33□□□□□ -0.92
CAPN1-213ENST00000527897 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
CAPN1-213ENST00000527897 LEPROTL1O95214 131 aa9.32□□□□□ -0.92
CAPN1-213ENST00000527897 UBE2AP49459 152 aa9.32□□□□□ -0.92
CAPN1-213ENST00000527897 VPREB1P12018 145 aa9.31□□□□□ -0.92
CAPN1-213ENST00000527897 FABP4P15090 132 aa9.31□□□□□ -0.92
CAPN1-213ENST00000527897 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms