RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
USP48-212ENST00000527823 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
USP48-212ENST00000527823 FAM210AQ96ND0 272 aa4.56□□□□□ -1.68
USP48-212ENST00000527823 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
USP48-212ENST00000527823 UMAD1C9J7I0 102 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 SMKR1H3BMG3 65 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 FCER1GP30273 86 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
USP48-212ENST00000527823 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
USP48-212ENST00000527823 RPL39P62891 51 aaKnown RBP4.54□□□□□ -1.68
USP48-212ENST00000527823 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
USP48-212ENST00000527823 LINC00469Q8N7U9 141 aa4.54□□□□□ -1.68
USP48-212ENST00000527823 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
USP48-212ENST00000527823 BIN3Q9NQY0 253 aa4.54□□□□□ -1.68
USP48-212ENST00000527823 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
USP48-212ENST00000527823 FP248Q71RG6 208 aaPredicted RBP4.53□□□□□ -1.68
USP48-212ENST00000527823 MRPL55Q7Z7F7 128 aaKnown RBP4.53□□□□□ -1.68
USP48-212ENST00000527823 NDUFA13Q9P0J0 144 aa4.53□□□□□ -1.68
USP48-212ENST00000527823 USH2AO75445 5202 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 SMLR1H3BR10 107 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 RAB4AP20338 218 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
USP48-212ENST00000527823 CTAG1AP78358 180 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 PACRGQ96M98 296 aaPredicted RBP4.52□□□□□ -1.69
USP48-212ENST00000527823 TMEM191AQ9H0A3 160 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 MED9Q9NWA0 146 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 TP73-AS1Q9UF72 201 aa4.52□□□□□ -1.69
USP48-212ENST00000527823 IGKV2D-26A0A0A0MRZ7 120 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 TGIF2-C20orf24A0A0A6YYL0 155 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 PDE6DO43924 150 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 HBBP68871 147 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 ZNF345Q14585 488 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 LBHQ53QV2 105 aaPredicted RBP4.51□□□□□ -1.69
USP48-212ENST00000527823 C3orf22Q8N5N4 141 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 KIR2DL4Q99706 377 aa4.51□□□□□ -1.69
USP48-212ENST00000527823 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
USP48-212ENST00000527823 ZNF727A8MUV8 499 aa4.5□□□□□ -1.69
USP48-212ENST00000527823 MRPS36P82909 103 aaKnown RBP4.5□□□□□ -1.69
USP48-212ENST00000527823 LINC00337Q8N6G1 96 aa4.5□□□□□ -1.69
USP48-212ENST00000527823 OCC1Q8TAD7 63 aa4.5□□□□□ -1.69
USP48-212ENST00000527823 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
USP48-212ENST00000527823 A0A1B0GUT8 65 aa4.49□□□□□ -1.69
USP48-212ENST00000527823 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
USP48-212ENST00000527823 GATCO43716 136 aaKnown RBP4.49□□□□□ -1.69
USP48-212ENST00000527823 UBE2AP49459 152 aa4.49□□□□□ -1.69
USP48-212ENST00000527823 PRLHP81277 87 aa4.49□□□□□ -1.69
USP48-212ENST00000527823 LINC00167Q96N53 147 aa4.49□□□□□ -1.69
USP48-212ENST00000527823 A8MWL6 223 aa4.48□□□□□ -1.69
USP48-212ENST00000527823 FAM231DQ6ZW35 169 aa4.48□□□□□ -1.69
USP48-212ENST00000527823 BORCS7Q96B45 105 aa4.48□□□□□ -1.69
USP48-212ENST00000527823 PPP1R2P9O14990 202 aa4.47□□□□□ -1.69
USP48-212ENST00000527823 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 KANTRA0A1W2PQU2 76 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 PPP1R17O96001 155 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
USP48-212ENST00000527823 ZC2HC1BQ5TFG8 222 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
USP48-212ENST00000527823 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
USP48-212ENST00000527823 SCO1O75880 301 aa4.45□□□□□ -1.7
USP48-212ENST00000527823 IGKV2D-28P01615 120 aa4.45□□□□□ -1.7
USP48-212ENST00000527823 MRPL51Q4U2R6 128 aaKnown RBP4.45□□□□□ -1.7
USP48-212ENST00000527823 SPAG11AQ6PDA7 123 aa4.45□□□□□ -1.7
USP48-212ENST00000527823 Q8IZM0 81 aa4.45□□□□□ -1.7
USP48-212ENST00000527823 TRBV24-1A0A075B6N3 115 aa4.44□□□□□ -1.7
USP48-212ENST00000527823 F8VRH5 84 aa4.44□□□□□ -1.7
USP48-212ENST00000527823 TCAPO15273 167 aa4.44□□□□□ -1.7
USP48-212ENST00000527823 IFI27P40305 119 aaPredicted RBP4.44□□□□□ -1.7
USP48-212ENST00000527823 CKS1BP61024 79 aa4.44□□□□□ -1.7
USP48-212ENST00000527823 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
USP48-212ENST00000527823 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
USP48-212ENST00000527823 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 FAM104BQ5XKR9 115 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 DAND5Q8N907 189 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 Q8NBF4 154 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 PLEKHB2Q96CS7 222 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 TMEM141Q96I45 108 aa4.43□□□□□ -1.7
USP48-212ENST00000527823 HMSDA8MTL9 139 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 NPYP01303 97 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 Q6ZN92 141 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 TEX43Q6ZNM6 134 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 FAM19A1Q7Z5A9 133 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 ALKBH7Q9BT30 221 aaPredicted RBP4.42□□□□□ -1.7
USP48-212ENST00000527823 TMEM126AQ9H061 195 aa4.42□□□□□ -1.7
USP48-212ENST00000527823 D6R8Y8 96 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 TMEM250H0YL14 139 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 RIGQ13278 110 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 C6orf226Q5I0X4 101 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 LINC01551Q86U37 167 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 EIF5A2Q9GZV4 153 aaKnown RBP4.41□□□□□ -1.7
USP48-212ENST00000527823 V9GYV3 84 aa4.41□□□□□ -1.7
USP48-212ENST00000527823 LINC00862A6NCI5 91 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms