RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 Q8IZM0 81 aa11.51□□□□□ -0.57
TSPAN4-215ENST00000525334 LINC00469Q8N7U9 141 aa11.51□□□□□ -0.57
TSPAN4-215ENST00000525334 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
TSPAN4-215ENST00000525334 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
TSPAN4-215ENST00000525334 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
TSPAN4-215ENST00000525334 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
TSPAN4-215ENST00000525334 LINC00614P0C842 121 aa11.49□□□□□ -0.57
TSPAN4-215ENST00000525334 CKS1BP61024 79 aa11.49□□□□□ -0.57
TSPAN4-215ENST00000525334 PMVKQ15126 192 aa11.49□□□□□ -0.57
TSPAN4-215ENST00000525334 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
TSPAN4-215ENST00000525334 IGLV5-45A0A087WSX0 123 aa11.48□□□□□ -0.57
TSPAN4-215ENST00000525334 FAM168BA1KXE4 195 aa11.48□□□□□ -0.57
TSPAN4-215ENST00000525334 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
TSPAN4-215ENST00000525334 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
TSPAN4-215ENST00000525334 HBDP02042 147 aa11.47□□□□□ -0.57
TSPAN4-215ENST00000525334 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
TSPAN4-215ENST00000525334 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
TSPAN4-215ENST00000525334 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
TSPAN4-215ENST00000525334 RAB5BP61020 215 aa11.45□□□□□ -0.58
TSPAN4-215ENST00000525334 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
TSPAN4-215ENST00000525334 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
TSPAN4-215ENST00000525334 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
TSPAN4-215ENST00000525334 F8VRH5 84 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 SPINK8P0C7L1 97 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 CXCL5P42830 114 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 NDUFA6P56556 154 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 KRTAP7-1Q8IUC3 87 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 PSORS1C2Q9UIG4 136 aa11.43□□□□□ -0.58
TSPAN4-215ENST00000525334 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
TSPAN4-215ENST00000525334 SERTAD4-AS1Q5TG53 156 aa11.42□□□□□ -0.58
TSPAN4-215ENST00000525334 MT1HL1P0DM35 61 aa11.41□□□□□ -0.58
TSPAN4-215ENST00000525334 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
TSPAN4-215ENST00000525334 H3BRM9 83 aa11.4□□□□□ -0.58
TSPAN4-215ENST00000525334 ATP5LO75964 103 aa11.4□□□□□ -0.58
TSPAN4-215ENST00000525334 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
TSPAN4-215ENST00000525334 M0QXV9 152 aa11.39□□□□□ -0.59
TSPAN4-215ENST00000525334 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
TSPAN4-215ENST00000525334 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
TSPAN4-215ENST00000525334 C1orf137Q5JT78 98 aa11.38□□□□□ -0.59
TSPAN4-215ENST00000525334 CHCHD1Q96BP2 118 aaKnown RBP11.38□□□□□ -0.59
TSPAN4-215ENST00000525334 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
TSPAN4-215ENST00000525334 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
TSPAN4-215ENST00000525334 HMCN2Q8NDA2 5059 aa11.36□□□□□ -0.59
TSPAN4-215ENST00000525334 TNXBP22105 4242 aa11.35□□□□□ -0.59
TSPAN4-215ENST00000525334 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
TSPAN4-215ENST00000525334 TRGC2P03986 189 aa11.35□□□□□ -0.59
TSPAN4-215ENST00000525334 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
TSPAN4-215ENST00000525334 UBE2BP63146 152 aa11.34□□□□□ -0.59
TSPAN4-215ENST00000525334 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
TSPAN4-215ENST00000525334 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
TSPAN4-215ENST00000525334 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
TSPAN4-215ENST00000525334 HSBP1O75506 76 aa11.31□□□□□ -0.6
TSPAN4-215ENST00000525334 IGLV7-43P04211 117 aa11.31□□□□□ -0.6
TSPAN4-215ENST00000525334 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
TSPAN4-215ENST00000525334 IFI27L1Q96BM0 104 aa11.31□□□□□ -0.6
TSPAN4-215ENST00000525334 C22orf24Q9Y442 160 aa11.31□□□□□ -0.6
TSPAN4-215ENST00000525334 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
TSPAN4-215ENST00000525334 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
TSPAN4-215ENST00000525334 COLCA2A8K830 154 aa11.28□□□□□ -0.6
TSPAN4-215ENST00000525334 LINC00310P59036 64 aa11.27□□□□□ -0.61
TSPAN4-215ENST00000525334 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
TSPAN4-215ENST00000525334 PLA2G2DQ9UNK4 145 aa11.27□□□□□ -0.61
TSPAN4-215ENST00000525334 SERF1AO75920 110 aa11.26□□□□□ -0.61
TSPAN4-215ENST00000525334 PFN2P35080 140 aa11.26□□□□□ -0.61
TSPAN4-215ENST00000525334 ODF1Q14990 250 aa11.26□□□□□ -0.61
TSPAN4-215ENST00000525334 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
TSPAN4-215ENST00000525334 TP73-AS1Q9UF72 201 aa11.26□□□□□ -0.61
TSPAN4-215ENST00000525334 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
TSPAN4-215ENST00000525334 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
TSPAN4-215ENST00000525334 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
TSPAN4-215ENST00000525334 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
TSPAN4-215ENST00000525334 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
TSPAN4-215ENST00000525334 H0Y9J4 135 aa11.22□□□□□ -0.61
TSPAN4-215ENST00000525334 LEPROTL1O95214 131 aa11.22□□□□□ -0.61
TSPAN4-215ENST00000525334 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
TSPAN4-215ENST00000525334 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.61
TSPAN4-215ENST00000525334 H0Y8G0 127 aa11.21□□□□□ -0.61
TSPAN4-215ENST00000525334 NUPR1O60356 82 aa11.21□□□□□ -0.61
TSPAN4-215ENST00000525334 SCO1O75880 301 aa11.2□□□□□ -0.62
TSPAN4-215ENST00000525334 COX17Q14061 63 aa11.2□□□□□ -0.62
TSPAN4-215ENST00000525334 LINC00167Q96N53 147 aa11.2□□□□□ -0.62
TSPAN4-215ENST00000525334 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
TSPAN4-215ENST00000525334 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
TSPAN4-215ENST00000525334 RPL37AP8A6NKH3 93 aa11.19□□□□□ -0.62
TSPAN4-215ENST00000525334 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
TSPAN4-215ENST00000525334 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
TSPAN4-215ENST00000525334 ZNF861PO60384 105 aa11.16□□□□□ -0.62
TSPAN4-215ENST00000525334 FABP4P15090 132 aa11.16□□□□□ -0.62
TSPAN4-215ENST00000525334 BCE1O60756 84 aa11.15□□□□□ -0.62
TSPAN4-215ENST00000525334 VPREB1P12018 145 aa11.15□□□□□ -0.62
TSPAN4-215ENST00000525334 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
TSPAN4-215ENST00000525334 LINC00158P58513 81 aa11.14□□□□□ -0.63
TSPAN4-215ENST00000525334 PRR26Q8N8Z3 221 aa11.14□□□□□ -0.63
TSPAN4-215ENST00000525334 UBR4Q5T4S7 5183 aa11.13□□□□□ -0.63
TSPAN4-215ENST00000525334 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
TSPAN4-215ENST00000525334 Q8NDZ9 215 aa11.13□□□□□ -0.63
TSPAN4-215ENST00000525334 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms