RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 Q8IZM0 81 aa10.81□□□□□ -0.68
TSPAN4-214ENST00000525201 LINC01546A6NGU7 62 aa10.8□□□□□ -0.68
TSPAN4-214ENST00000525201 NDUFC2-KCTD14E9PQ53 114 aa10.8□□□□□ -0.68
TSPAN4-214ENST00000525201 CXCL5P42830 114 aa10.8□□□□□ -0.68
TSPAN4-214ENST00000525201 C10orf25Q5T742 122 aa10.8□□□□□ -0.68
TSPAN4-214ENST00000525201 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
TSPAN4-214ENST00000525201 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
TSPAN4-214ENST00000525201 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
TSPAN4-214ENST00000525201 PKHD1L1Q86WI1 4243 aa10.78□□□□□ -0.68
TSPAN4-214ENST00000525201 ZC2HC1BQ5TFG8 222 aa10.78□□□□□ -0.68
TSPAN4-214ENST00000525201 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
TSPAN4-214ENST00000525201 PLA2G2DQ9UNK4 145 aa10.78□□□□□ -0.68
TSPAN4-214ENST00000525201 UBR4Q5T4S7 5183 aa10.77□□□□□ -0.69
TSPAN4-214ENST00000525201 C2orf82Q6UX34 121 aa10.77□□□□□ -0.69
TSPAN4-214ENST00000525201 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
TSPAN4-214ENST00000525201 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
TSPAN4-214ENST00000525201 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 PHF5AQ7RTV0 110 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
TSPAN4-214ENST00000525201 F8VRH5 84 aa10.75□□□□□ -0.69
TSPAN4-214ENST00000525201 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
TSPAN4-214ENST00000525201 C1orf137Q5JT78 98 aa10.75□□□□□ -0.69
TSPAN4-214ENST00000525201 M0QXV9 152 aa10.74□□□□□ -0.69
TSPAN4-214ENST00000525201 LINC00614P0C842 121 aa10.74□□□□□ -0.69
TSPAN4-214ENST00000525201 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
TSPAN4-214ENST00000525201 PMVKQ15126 192 aa10.74□□□□□ -0.69
TSPAN4-214ENST00000525201 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
TSPAN4-214ENST00000525201 H3BRM9 83 aa10.73□□□□□ -0.69
TSPAN4-214ENST00000525201 UBE2BP63146 152 aa10.73□□□□□ -0.69
TSPAN4-214ENST00000525201 LRP1Q07954 4544 aaKnown RBP10.73□□□□□ -0.69
TSPAN4-214ENST00000525201 IGLV5-45A0A087WSX0 123 aa10.72□□□□□ -0.69
TSPAN4-214ENST00000525201 RAB5BP61020 215 aa10.72□□□□□ -0.69
TSPAN4-214ENST00000525201 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
TSPAN4-214ENST00000525201 FAT3Q8TDW7 4589 aa10.71□□□□□ -0.69
TSPAN4-214ENST00000525201 FAM168BA1KXE4 195 aa10.71□□□□□ -0.69
TSPAN4-214ENST00000525201 LINC00310P59036 64 aa10.71□□□□□ -0.69
TSPAN4-214ENST00000525201 BAGE3Q86Y29 109 aa10.71□□□□□ -0.69
TSPAN4-214ENST00000525201 SMIM1B2RUZ4 78 aa10.7□□□□□ -0.7
TSPAN4-214ENST00000525201 ODF1Q14990 250 aa10.7□□□□□ -0.7
TSPAN4-214ENST00000525201 COX7B2Q8TF08 81 aa10.7□□□□□ -0.7
TSPAN4-214ENST00000525201 DIRC1Q969H9 104 aa10.7□□□□□ -0.7
TSPAN4-214ENST00000525201 CHCHD1Q96BP2 118 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-214ENST00000525201 NUPR1O60356 82 aa10.69□□□□□ -0.7
TSPAN4-214ENST00000525201 HBDP02042 147 aa10.69□□□□□ -0.7
TSPAN4-214ENST00000525201 IGLV7-43P04211 117 aa10.69□□□□□ -0.7
TSPAN4-214ENST00000525201 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
TSPAN4-214ENST00000525201 A0A096LNJ9 63 aa10.68□□□□□ -0.7
TSPAN4-214ENST00000525201 SERF1AO75920 110 aa10.68□□□□□ -0.7
TSPAN4-214ENST00000525201 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
TSPAN4-214ENST00000525201 C9orf129Q5T035 196 aaKnown RBP10.68□□□□□ -0.7
TSPAN4-214ENST00000525201 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-214ENST00000525201 ATP5LO75964 103 aa10.66□□□□□ -0.7
TSPAN4-214ENST00000525201 NDUFA6P56556 154 aa10.66□□□□□ -0.7
TSPAN4-214ENST00000525201 PMCHL1Q16048 86 aa10.65□□□□□ -0.7
TSPAN4-214ENST00000525201 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
TSPAN4-214ENST00000525201 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
TSPAN4-214ENST00000525201 IGLC3P0DOY3 106 aa10.64□□□□□ -0.71
TSPAN4-214ENST00000525201 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
TSPAN4-214ENST00000525201 HSBP1O75506 76 aa10.63□□□□□ -0.71
TSPAN4-214ENST00000525201 FAM19A2Q8N3H0 131 aa10.63□□□□□ -0.71
TSPAN4-214ENST00000525201 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
TSPAN4-214ENST00000525201 H0Y9J4 135 aa10.62□□□□□ -0.71
TSPAN4-214ENST00000525201 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
TSPAN4-214ENST00000525201 KRTAP7-1Q8IUC3 87 aa10.61□□□□□ -0.71
TSPAN4-214ENST00000525201 C22orf24Q9Y442 160 aa10.61□□□□□ -0.71
TSPAN4-214ENST00000525201 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
TSPAN4-214ENST00000525201 IGLV5-39A0A0G2JS06 123 aa10.58□□□□□ -0.72
TSPAN4-214ENST00000525201 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
TSPAN4-214ENST00000525201 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
TSPAN4-214ENST00000525201 COX17Q14061 63 aa10.57□□□□□ -0.72
TSPAN4-214ENST00000525201 KRTAP11-1Q8IUC1 163 aa10.57□□□□□ -0.72
TSPAN4-214ENST00000525201 NKAPP1Q8N9T2 125 aa10.57□□□□□ -0.72
TSPAN4-214ENST00000525201 S100A6P06703 90 aa10.56□□□□□ -0.72
TSPAN4-214ENST00000525201 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
TSPAN4-214ENST00000525201 ZNF861PO60384 105 aa10.55□□□□□ -0.72
TSPAN4-214ENST00000525201 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
TSPAN4-214ENST00000525201 RPL13AP40429 203 aaKnown RBP10.55□□□□□ -0.72
TSPAN4-214ENST00000525201 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
TSPAN4-214ENST00000525201 CHTOPQ9Y3Y2 248 aaKnown RBP10.55□□□□□ -0.72
TSPAN4-214ENST00000525201 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
TSPAN4-214ENST00000525201 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
TSPAN4-214ENST00000525201 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
TSPAN4-214ENST00000525201 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
TSPAN4-214ENST00000525201 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
TSPAN4-214ENST00000525201 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
TSPAN4-214ENST00000525201 FABP4P15090 132 aa10.53□□□□□ -0.72
TSPAN4-214ENST00000525201 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms