RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 CXCL5P42830 114 aa11.64□□□□□ -0.55
SREK1-207ENST00000520058 PDZD11Q5EBL8 140 aa11.64□□□□□ -0.55
SREK1-207ENST00000520058 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
SREK1-207ENST00000520058 C6orf48Q9UBA6 75 aa11.63□□□□□ -0.55
SREK1-207ENST00000520058 IGLV5-45A0A087WSX0 123 aa11.62□□□□□ -0.55
SREK1-207ENST00000520058 C10orf25Q5T742 122 aa11.62□□□□□ -0.55
SREK1-207ENST00000520058 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
SREK1-207ENST00000520058 NDUFC2-KCTD14E9PQ53 114 aa11.6□□□□□ -0.55
SREK1-207ENST00000520058 F8VRH5 84 aa11.6□□□□□ -0.55
SREK1-207ENST00000520058 COLCA2A8K830 154 aa11.59□□□□□ -0.55
SREK1-207ENST00000520058 SMIM1B2RUZ4 78 aa11.59□□□□□ -0.55
SREK1-207ENST00000520058 GAGE2EQ4V326 116 aa11.59□□□□□ -0.55
SREK1-207ENST00000520058 COX7B2Q8TF08 81 aa11.59□□□□□ -0.55
SREK1-207ENST00000520058 GAGE2DQ9UEU5 116 aa11.59□□□□□ -0.55
SREK1-207ENST00000520058 C9orf116Q5BN46 136 aaPredicted RBP11.58□□□□□ -0.56
SREK1-207ENST00000520058 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
SREK1-207ENST00000520058 VPS13BQ7Z7G8 4022 aa11.57□□□□□ -0.56
SREK1-207ENST00000520058 SPINK8P0C7L1 97 aa11.57□□□□□ -0.56
SREK1-207ENST00000520058 Q6ZRP5 223 aa11.57□□□□□ -0.56
SREK1-207ENST00000520058 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
SREK1-207ENST00000520058 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
SREK1-207ENST00000520058 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
SREK1-207ENST00000520058 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
SREK1-207ENST00000520058 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
SREK1-207ENST00000520058 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
SREK1-207ENST00000520058 LEPROTL1O95214 131 aa11.54□□□□□ -0.56
SREK1-207ENST00000520058 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
SREK1-207ENST00000520058 J3QL48 77 aa11.53□□□□□ -0.56
SREK1-207ENST00000520058 ZNF22P17026 224 aaPredicted RBP11.53□□□□□ -0.56
SREK1-207ENST00000520058 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
SREK1-207ENST00000520058 SERF1AO75920 110 aa11.52□□□□□ -0.57
SREK1-207ENST00000520058 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.57
SREK1-207ENST00000520058 PRR3P79522 188 aaKnown RBP11.51□□□□□ -0.57
SREK1-207ENST00000520058 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
SREK1-207ENST00000520058 FAM19A5Q7Z5A7 132 aaPredicted RBP11.5□□□□□ -0.57
SREK1-207ENST00000520058 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
SREK1-207ENST00000520058 KRTAP29-1A8MX34 341 aaPredicted RBP11.48□□□□□ -0.57
SREK1-207ENST00000520058 SCO1O75880 301 aa11.48□□□□□ -0.57
SREK1-207ENST00000520058 OXTP01178 125 aa11.48□□□□□ -0.57
SREK1-207ENST00000520058 H0Y8G0 127 aa11.47□□□□□ -0.57
SREK1-207ENST00000520058 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
SREK1-207ENST00000520058 FAM168BA1KXE4 195 aa11.46□□□□□ -0.57
SREK1-207ENST00000520058 M0QXV9 152 aa11.46□□□□□ -0.57
SREK1-207ENST00000520058 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.57
SREK1-207ENST00000520058 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
SREK1-207ENST00000520058 FABP4P15090 132 aa11.45□□□□□ -0.58
SREK1-207ENST00000520058 UBE2BP63146 152 aa11.45□□□□□ -0.58
SREK1-207ENST00000520058 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
SREK1-207ENST00000520058 COX17Q14061 63 aa11.44□□□□□ -0.58
SREK1-207ENST00000520058 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
SREK1-207ENST00000520058 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
SREK1-207ENST00000520058 PLNP26678 52 aa11.43□□□□□ -0.58
SREK1-207ENST00000520058 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
SREK1-207ENST00000520058 LINC00310P59036 64 aa11.43□□□□□ -0.58
SREK1-207ENST00000520058 SPINK6Q6UWN8 80 aa11.43□□□□□ -0.58
SREK1-207ENST00000520058 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BKO60814 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BJP06899 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BOP23527 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BBP33778 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 PFN2P35080 140 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 C1orf137Q5JT78 98 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 PSORS1C2Q9UIG4 136 aa11.42□□□□□ -0.58
SREK1-207ENST00000520058 NUPR1O60356 82 aa11.41□□□□□ -0.58
SREK1-207ENST00000520058 S100A1P23297 94 aa11.41□□□□□ -0.58
SREK1-207ENST00000520058 ODF1Q14990 250 aa11.41□□□□□ -0.58
SREK1-207ENST00000520058 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
SREK1-207ENST00000520058 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
SREK1-207ENST00000520058 HERVK_113P61574 105 aa11.39□□□□□ -0.59
SREK1-207ENST00000520058 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
SREK1-207ENST00000520058 C22orf24Q9Y442 160 aa11.39□□□□□ -0.59
SREK1-207ENST00000520058 LINC00587B1AMM8 73 aa11.38□□□□□ -0.59
SREK1-207ENST00000520058 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
SREK1-207ENST00000520058 DPM2O94777 84 aa11.38□□□□□ -0.59
SREK1-207ENST00000520058 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
SREK1-207ENST00000520058 PLA2G2DQ9UNK4 145 aa11.38□□□□□ -0.59
SREK1-207ENST00000520058 NKAPP1Q8N9T2 125 aa11.37□□□□□ -0.59
SREK1-207ENST00000520058 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
SREK1-207ENST00000520058 IGKCP01834 107 aa11.36□□□□□ -0.59
SREK1-207ENST00000520058 HERV-K104P63124 156 aa11.36□□□□□ -0.59
SREK1-207ENST00000520058 SERTAD4-AS1Q5TG53 156 aa11.36□□□□□ -0.59
SREK1-207ENST00000520058 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
SREK1-207ENST00000520058 LINC00158P58513 81 aa11.35□□□□□ -0.59
SREK1-207ENST00000520058 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
SREK1-207ENST00000520058 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
SREK1-207ENST00000520058 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
SREK1-207ENST00000520058 MYMXA0A1B0GTQ4 84 aa11.34□□□□□ -0.59
SREK1-207ENST00000520058 IGLV7-43P04211 117 aa11.34□□□□□ -0.59
SREK1-207ENST00000520058 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
SREK1-207ENST00000520058 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
SREK1-207ENST00000520058 SND1-IT1Q9HBX3 110 aa11.33□□□□□ -0.6
SREK1-207ENST00000520058 LEPROTO15243 131 aa11.32□□□□□ -0.6
SREK1-207ENST00000520058 DIRC1Q969H9 104 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms