RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
VEGFA-219ENST00000518824 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
VEGFA-219ENST00000518824 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
VEGFA-219ENST00000518824 TINCRA0A1B0GVN0 87 aa8.25□□□□□ -1.09
VEGFA-219ENST00000518824 SMIM1B2RUZ4 78 aa8.25□□□□□ -1.09
VEGFA-219ENST00000518824 PMVKQ15126 192 aa8.25□□□□□ -1.09
VEGFA-219ENST00000518824 KRTAP11-1Q8IUC1 163 aa8.25□□□□□ -1.09
VEGFA-219ENST00000518824 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
VEGFA-219ENST00000518824 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
VEGFA-219ENST00000518824 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
VEGFA-219ENST00000518824 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
VEGFA-219ENST00000518824 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 OXTP01178 125 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 PRSS2P07478 247 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 SEC11AP67812 179 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 C6orf226Q5I0X4 101 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
VEGFA-219ENST00000518824 Q8IZM0 81 aa8.23□□□□□ -1.09
VEGFA-219ENST00000518824 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-219ENST00000518824 HBDP02042 147 aa8.22□□□□□ -1.09
VEGFA-219ENST00000518824 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
VEGFA-219ENST00000518824 NDUFA6P56556 154 aa8.22□□□□□ -1.09
VEGFA-219ENST00000518824 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
VEGFA-219ENST00000518824 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
VEGFA-219ENST00000518824 CKS1BP61024 79 aa8.21□□□□□ -1.1
VEGFA-219ENST00000518824 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
VEGFA-219ENST00000518824 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
VEGFA-219ENST00000518824 TRGC2P03986 189 aa8.2□□□□□ -1.1
VEGFA-219ENST00000518824 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
VEGFA-219ENST00000518824 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
VEGFA-219ENST00000518824 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-219ENST00000518824 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
VEGFA-219ENST00000518824 SERTAD4-AS1Q5TG53 156 aa8.19□□□□□ -1.1
VEGFA-219ENST00000518824 XAGE1AQ9HD64 81 aa8.19□□□□□ -1.1
VEGFA-219ENST00000518824 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
VEGFA-219ENST00000518824 F8VRH5 84 aa8.18□□□□□ -1.1
VEGFA-219ENST00000518824 LINC00310P59036 64 aa8.18□□□□□ -1.1
VEGFA-219ENST00000518824 RAB5BP61020 215 aa8.18□□□□□ -1.1
VEGFA-219ENST00000518824 FAM19A2Q8N3H0 131 aa8.18□□□□□ -1.1
VEGFA-219ENST00000518824 COLCA2A8K830 154 aa8.17□□□□□ -1.1
VEGFA-219ENST00000518824 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
VEGFA-219ENST00000518824 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 M0QXV9 152 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 SCO1O75880 301 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 ATP5LO75964 103 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 ODF1Q14990 250 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 C1orf137Q5JT78 98 aa8.16□□□□□ -1.1
VEGFA-219ENST00000518824 CHCHD1Q96BP2 118 aaKnown RBP8.16□□□□□ -1.1
VEGFA-219ENST00000518824 NUPR1O60356 82 aa8.15□□□□□ -1.1
VEGFA-219ENST00000518824 CXCL5P42830 114 aa8.14□□□□□ -1.11
VEGFA-219ENST00000518824 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
VEGFA-219ENST00000518824 H3BRM9 83 aa8.13□□□□□ -1.11
VEGFA-219ENST00000518824 IFI27L1Q96BM0 104 aa8.13□□□□□ -1.11
VEGFA-219ENST00000518824 CHTOPQ9Y3Y2 248 aaKnown RBP8.13□□□□□ -1.11
VEGFA-219ENST00000518824 C22orf24Q9Y442 160 aa8.13□□□□□ -1.11
VEGFA-219ENST00000518824 TNXBP22105 4242 aa8.12□□□□□ -1.11
VEGFA-219ENST00000518824 SERF1AO75920 110 aa8.12□□□□□ -1.11
VEGFA-219ENST00000518824 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
VEGFA-219ENST00000518824 HSBP1O75506 76 aa8.11□□□□□ -1.11
VEGFA-219ENST00000518824 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
VEGFA-219ENST00000518824 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
VEGFA-219ENST00000518824 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
VEGFA-219ENST00000518824 UBE2BP63146 152 aa8.1□□□□□ -1.11
VEGFA-219ENST00000518824 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
VEGFA-219ENST00000518824 H0Y8G0 127 aa8.09□□□□□ -1.11
VEGFA-219ENST00000518824 PFN2P35080 140 aa8.09□□□□□ -1.11
VEGFA-219ENST00000518824 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
VEGFA-219ENST00000518824 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
VEGFA-219ENST00000518824 Q8NDZ9 215 aa8.07□□□□□ -1.12
VEGFA-219ENST00000518824 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
VEGFA-219ENST00000518824 FABP4P15090 132 aa8.06□□□□□ -1.12
VEGFA-219ENST00000518824 REG3GQ6UW15 175 aa8.06□□□□□ -1.12
VEGFA-219ENST00000518824 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
VEGFA-219ENST00000518824 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
VEGFA-219ENST00000518824 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
VEGFA-219ENST00000518824 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
VEGFA-219ENST00000518824 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
VEGFA-219ENST00000518824 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
VEGFA-219ENST00000518824 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
VEGFA-219ENST00000518824 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
VEGFA-219ENST00000518824 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
VEGFA-219ENST00000518824 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
VEGFA-219ENST00000518824 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 H0Y9J4 135 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
VEGFA-219ENST00000518824 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
VEGFA-219ENST00000518824 VPREB1P12018 145 aa8.02□□□□□ -1.13
VEGFA-219ENST00000518824 LBHQ53QV2 105 aaPredicted RBP8.02□□□□□ -1.13
VEGFA-219ENST00000518824 DIRC1Q969H9 104 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms