RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 C2orf82Q6UX34 121 aa2.39□□□□□ -2.03
CDH12P3-201ENST00000517935 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
CDH12P3-201ENST00000517935 MCFD2Q8NI22 146 aa2.39□□□□□ -2.03
CDH12P3-201ENST00000517935 HIGD2AQ9BW72 106 aa2.39□□□□□ -2.03
CDH12P3-201ENST00000517935 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 FAM240BA0A1B0GVZ2 78 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 A0A1W2PRE2 83 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 PCP4L1A6NKN8 68 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 FAM25EA8MYX2 175 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 TRGC1P0CF51 173 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 TEX261Q6UWH6 196 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 LINC01561Q8N1V8 128 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 NKAPP1Q8N9T2 125 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 HIST1H2BAQ96A08 127 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 FMC1Q96HJ9 113 aa2.38□□□□□ -2.03
CDH12P3-201ENST00000517935 FXYD6-FXYD2A0A087WZ82 144 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 M0R378 163 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 LTAP01374 205 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 IFNA1P01562 189 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 ARL14EPLP0DKL9 152 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 AQP4P55087 323 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 Q6ZVH6 145 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 GATD1Q8NB37 220 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 DEDD2Q8WXF8 326 aa2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 NKX6-2Q9C056 277 aaPredicted RBP2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 LSM5Q9Y4Y9 91 aaKnown RBP2.37□□□□□ -2.03
CDH12P3-201ENST00000517935 C7orf77A4D0Y5 90 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 TMEM238C9JI98 176 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 PEX7O00628 323 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 STAG3L2P0CL84 134 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 STAG3L3P0CL85 134 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 PMCHP20382 165 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 GCHFRP30047 84 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 DSCR10P59022 87 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 CKS1BP61024 79 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 TMEM167BQ9NRX6 74 aa2.36□□□□□ -2.03
CDH12P3-201ENST00000517935 TGIF2-C20orf24A0A0A6YYL0 155 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 A8MWP4 228 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 F2Z2F3 143 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 DEFA3P59666 94 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 AP3S2P59780 193 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 VBP1P61758 197 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 UBE2G1P62253 170 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 C11orf52Q96A22 123 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
CDH12P3-201ENST00000517935 TRBV6-5A0A0K0K1A5 114 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 FAM236DA0A1B0GTK5 79 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 HMGB3O15347 200 aaKnown RBP2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 NDUFB6O95139 128 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 CXorf1O96002 111 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 IGLC6P0CF74 106 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 FAM236CP0DP71 79 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 NDUFV3P56181 108 aaKnown RBP2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 LSM3P62310 102 aaKnown RBP2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 RNASE13Q5GAN3 156 aaKnown RBP2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 CNBD2Q96M20 576 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 TCEAL7Q9BRU2 100 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 RPS10P5Q9NQ39 176 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 RAB26Q9ULW5 256 aa2.34□□□□□ -2.03
CDH12P3-201ENST00000517935 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 F8VRH5 84 aa2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 ATP5LO75964 103 aa2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 CDC34P49427 236 aaPredicted RBP2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 SCGB1C1Q8TD33 95 aa2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 RNASE7Q9H1E1 156 aaKnown RBP2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 CHTOPQ9Y3Y2 248 aaKnown RBP2.33□□□□□ -2.04
CDH12P3-201ENST00000517935 TEX46H3BTG2 121 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 RGS5O15539 181 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 S100A9P06702 114 aaKnown RBP2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 IL15RAQ13261 267 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 NEDD8Q15843 81 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 Q6ZUT4 128 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 Q8IZM0 81 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 NUDT15Q9NV35 164 aa2.32□□□□□ -2.04
CDH12P3-201ENST00000517935 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 Q5XG85 94 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 AKAP14Q86UN6 197 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 TOMM5Q8N4H5 51 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 SMCR5Q8TEV8 140 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 ST20Q9HBF5 79 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
CDH12P3-201ENST00000517935 FCER1GP30273 86 aa2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 POLR2KP53803 58 aaKnown RBP2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 HBBP68871 147 aa2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 C1orf195Q5TG92 126 aa2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 C9orf62Q8N4C0 152 aa2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 CNFNQ9BYD5 112 aa2.3□□□□□ -2.04
CDH12P3-201ENST00000517935 IGLV4-3A0A075B6K6 122 aa2.29□□□□□ -2.04
CDH12P3-201ENST00000517935 A0A0G2JQZ4 141 aa2.29□□□□□ -2.04
CDH12P3-201ENST00000517935 SCO1O75880 301 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms