RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 IGLV1-40P01703 118 aa9.59□□□□□ -0.88
TCOF1-214ENST00000515035 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
TCOF1-214ENST00000515035 PTPRSQ13332 1948 aa9.58□□□□□ -0.88
TCOF1-214ENST00000515035 PRO0628Q9UI54 55 aa9.58□□□□□ -0.88
TCOF1-214ENST00000515035 CDSNQ15517 529 aa9.58□□□□□ -0.88
TCOF1-214ENST00000515035 AGRNO00468 2067 aa9.57□□□□□ -0.88
TCOF1-214ENST00000515035 BEAN1Q3B7T3 259 aa9.57□□□□□ -0.88
TCOF1-214ENST00000515035 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
TCOF1-214ENST00000515035 Q6ZVQ6 151 aa9.57□□□□□ -0.88
TCOF1-214ENST00000515035 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
TCOF1-214ENST00000515035 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
TCOF1-214ENST00000515035 EGFEM1PQ0D2K5 195 aa9.56□□□□□ -0.88
TCOF1-214ENST00000515035 ESRGQ1W209 222 aa9.56□□□□□ -0.88
TCOF1-214ENST00000515035 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
TCOF1-214ENST00000515035 MUC4Q99102 2169 aa9.55□□□□□ -0.88
TCOF1-214ENST00000515035 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
TCOF1-214ENST00000515035 PLAC8L1A1L4L8 177 aa9.54□□□□□ -0.88
TCOF1-214ENST00000515035 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
TCOF1-214ENST00000515035 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
TCOF1-214ENST00000515035 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
TCOF1-214ENST00000515035 C7orf33Q8WU49 177 aa9.53□□□□□ -0.88
TCOF1-214ENST00000515035 LRP4O75096 1905 aa9.53□□□□□ -0.88
TCOF1-214ENST00000515035 COL5A1P20908 1838 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-214ENST00000515035 SETD2Q9BYW2 2564 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-214ENST00000515035 EDN2P20800 178 aa9.52□□□□□ -0.88
TCOF1-214ENST00000515035 KRTAP10-9P60411 292 aa9.51□□□□□ -0.89
TCOF1-214ENST00000515035 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
TCOF1-214ENST00000515035 WDR87Q6ZQQ6 2873 aa9.5□□□□□ -0.89
TCOF1-214ENST00000515035 CRYGAP11844 174 aa9.5□□□□□ -0.89
TCOF1-214ENST00000515035 H0Y9P7 68 aa9.5□□□□□ -0.89
TCOF1-214ENST00000515035 FN1P02751 2386 aaKnown RBP9.5□□□□□ -0.89
TCOF1-214ENST00000515035 EP400Q96L91 3159 aa9.49□□□□□ -0.89
TCOF1-214ENST00000515035 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-214ENST00000515035 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
TCOF1-214ENST00000515035 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
TCOF1-214ENST00000515035 A0A087WSZ3 146 aa9.48□□□□□ -0.89
TCOF1-214ENST00000515035 IGHV6-1A0A0B4J1U7 121 aa9.48□□□□□ -0.89
TCOF1-214ENST00000515035 AVPP01185 164 aa9.47□□□□□ -0.89
TCOF1-214ENST00000515035 USP9XQ93008 2570 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-214ENST00000515035 A8MTW9 85 aa9.47□□□□□ -0.89
TCOF1-214ENST00000515035 CXCL6P80162 114 aa9.46□□□□□ -0.89
TCOF1-214ENST00000515035 REG3GQ6UW15 175 aa9.46□□□□□ -0.89
TCOF1-214ENST00000515035 C6orf223Q8N319 242 aa9.46□□□□□ -0.89
TCOF1-214ENST00000515035 hDV103S1A0JD37 113 aa9.46□□□□□ -0.9
TCOF1-214ENST00000515035 PKD1L2Q7Z442 2459 aa9.46□□□□□ -0.9
TCOF1-214ENST00000515035 ABCA12Q86UK0 2595 aa9.46□□□□□ -0.9
TCOF1-214ENST00000515035 C4orf26Q17RF5 130 aa9.46□□□□□ -0.9
TCOF1-214ENST00000515035 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 HCG22E2RYF7 251 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
TCOF1-214ENST00000515035 DEFB116Q30KQ4 102 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 Q6ZSN1 163 aa9.45□□□□□ -0.9
TCOF1-214ENST00000515035 SMR3AQ99954 134 aa9.44□□□□□ -0.9
TCOF1-214ENST00000515035 FHL2Q14192 279 aa9.43□□□□□ -0.9
TCOF1-214ENST00000515035 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
TCOF1-214ENST00000515035 Q9BRP9 147 aa9.42□□□□□ -0.9
TCOF1-214ENST00000515035 CEP295Q9C0D2 2601 aa9.42□□□□□ -0.9
TCOF1-214ENST00000515035 M0R2N4 97 aa9.42□□□□□ -0.9
TCOF1-214ENST00000515035 A0A1W2PPR1 153 aa9.41□□□□□ -0.9
TCOF1-214ENST00000515035 SPINK1P00995 79 aa9.41□□□□□ -0.9
TCOF1-214ENST00000515035 CHD8Q9HCK8 2581 aa9.41□□□□□ -0.9
TCOF1-214ENST00000515035 ZFYVE26Q68DK2 2539 aa9.41□□□□□ -0.9
TCOF1-214ENST00000515035 Q8N2B8 174 aa9.4□□□□□ -0.9
TCOF1-214ENST00000515035 Q9UF83 564 aa9.4□□□□□ -0.9
TCOF1-214ENST00000515035 A0A1B0GUV1 79 aa9.4□□□□□ -0.91
TCOF1-214ENST00000515035 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.91
TCOF1-214ENST00000515035 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
TCOF1-214ENST00000515035 ANKRD11Q6UB99 2663 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-214ENST00000515035 F8P00451 2351 aa9.39□□□□□ -0.91
TCOF1-214ENST00000515035 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
TCOF1-214ENST00000515035 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
TCOF1-214ENST00000515035 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
TCOF1-214ENST00000515035 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
TCOF1-214ENST00000515035 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
TCOF1-214ENST00000515035 BCE1O60756 84 aa9.38□□□□□ -0.91
TCOF1-214ENST00000515035 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
TCOF1-214ENST00000515035 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
TCOF1-214ENST00000515035 SPATA3Q8NHX4 192 aa9.37□□□□□ -0.91
TCOF1-214ENST00000515035 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
TCOF1-214ENST00000515035 X6R8D5 127 aa9.36□□□□□ -0.91
TCOF1-214ENST00000515035 USP9YO00507 2555 aaPredicted RBP9.36□□□□□ -0.91
TCOF1-214ENST00000515035 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
TCOF1-214ENST00000515035 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
TCOF1-214ENST00000515035 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
TCOF1-214ENST00000515035 BRI3O95415 125 aa9.34□□□□□ -0.91
TCOF1-214ENST00000515035 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
TCOF1-214ENST00000515035 FAM218AQ96MZ4 157 aa9.33□□□□□ -0.92
TCOF1-214ENST00000515035 Q6ZRU5 148 aa9.32□□□□□ -0.92
TCOF1-214ENST00000515035 F8WDY8 70 aa9.32□□□□□ -0.92
TCOF1-214ENST00000515035 IGHV3OR16-9A0A0B4J2B5 98 aa9.31□□□□□ -0.92
TCOF1-214ENST00000515035 SPTBN4Q9H254 2564 aa9.31□□□□□ -0.92
TCOF1-214ENST00000515035 EXPH5Q8NEV8 1989 aa9.31□□□□□ -0.92
TCOF1-214ENST00000515035 LINC00315P59091 139 aa9.3□□□□□ -0.92
TCOF1-214ENST00000515035 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
TCOF1-214ENST00000515035 Q6ZTC4 211 aa9.3□□□□□ -0.92
TCOF1-214ENST00000515035 PRLHP81277 87 aa9.3□□□□□ -0.92
TCOF1-214ENST00000515035 A0A1B0GU69 56 aa9.29□□□□□ -0.92
TCOF1-214ENST00000515035 LY6G6CO95867 125 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms