RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 ORMDL2Q53FV1 153 aa5.42□□□□□ -1.54
HERC4-214ENST00000513996 TEX43Q6ZNM6 134 aa5.42□□□□□ -1.54
HERC4-214ENST00000513996 VCX2Q9H322 139 aa5.42□□□□□ -1.54
HERC4-214ENST00000513996 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
HERC4-214ENST00000513996 C6orf48Q9UBA6 75 aa5.42□□□□□ -1.54
HERC4-214ENST00000513996 F8WDY8 70 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 K7EMI3 77 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 NDUFA1O15239 70 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 LINC00310P59036 64 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 C9orf116Q5BN46 136 aaPredicted RBP5.41□□□□□ -1.54
HERC4-214ENST00000513996 C2orf82Q6UX34 121 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 ALKBH7Q9BT30 221 aaPredicted RBP5.41□□□□□ -1.54
HERC4-214ENST00000513996 PKIGQ9Y2B9 76 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 TRAPPC1Q9Y5R8 145 aa5.41□□□□□ -1.54
HERC4-214ENST00000513996 LINC01546A6NGU7 62 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 TRGC2P03986 189 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 RAB5BP61020 215 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 RPL18AQ02543 176 aaKnown RBP5.4□□□□□ -1.54
HERC4-214ENST00000513996 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.542e-8■■■□□ 15.1
HERC4-214ENST00000513996 Q6ZRP5 223 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.54
HERC4-214ENST00000513996 FAM168BA1KXE4 195 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 NPSP0C0P6 89 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 Q6ZN92 141 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
HERC4-214ENST00000513996 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 TIMM17AQ99595 171 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 C2orf88Q9BSF0 95 aa5.39□□□□□ -1.55
HERC4-214ENST00000513996 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 COA6Q5JTJ3 125 aaKnown RBP5.38□□□□□ -1.55
HERC4-214ENST00000513996 ERASQ7Z444 233 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
HERC4-214ENST00000513996 TNXBP22105 4242 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BHQ93079 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 URB1-AS1Q96HZ7 61 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BNQ99877 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 HIST1H2BMQ99879 126 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 PSORS1C2Q9UIG4 136 aa5.37□□□□□ -1.55
HERC4-214ENST00000513996 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 G0S2P27469 103 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
HERC4-214ENST00000513996 SERTAD4-AS1Q5TG53 156 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 SPINK6Q6UWN8 80 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 LINC01600Q96MT4 127 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 CST9LQ9H4G1 147 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
HERC4-214ENST00000513996 A0A096LNJ9 63 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 HERVK_113P63121 156 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 C6orf226Q5I0X4 101 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 PAPPA-AS1Q5QFB9 102 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 C18orf32Q8TCD1 76 aa5.35□□□□□ -1.55
HERC4-214ENST00000513996 PACRGQ96M98 296 aaPredicted RBP5.35□□□□□ -1.55
HERC4-214ENST00000513996 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
HERC4-214ENST00000513996 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 TINCRA0A1B0GVN0 87 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 C5orf52A6NGY3 159 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 S100A6P06703 90 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 PRSS2P07478 247 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 KRTAP10-8P60410 259 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 SEC11AP67812 179 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 FAM19A5Q7Z5A7 132 aaPredicted RBP5.34□□□□□ -1.55
HERC4-214ENST00000513996 Q8IZM0 81 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 LINC00469Q8N7U9 141 aa5.34□□□□□ -1.55
HERC4-214ENST00000513996 LINC00614P0C842 121 aa5.33□□□□□ -1.56
HERC4-214ENST00000513996 CKS1BP61024 79 aa5.33□□□□□ -1.56
HERC4-214ENST00000513996 PMVKQ15126 192 aa5.33□□□□□ -1.56
HERC4-214ENST00000513996 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
HERC4-214ENST00000513996 LINC01549A6NIU2 74 aa5.32□□□□□ -1.56
HERC4-214ENST00000513996 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
HERC4-214ENST00000513996 PMCHL1Q16048 86 aa5.32□□□□□ -1.56
HERC4-214ENST00000513996 XAGE1AQ9HD64 81 aa5.32□□□□□ -1.56
HERC4-214ENST00000513996 F8VRH5 84 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 M0QXV9 152 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 NDUFA6P56556 154 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 PDZD11Q5EBL8 140 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
HERC4-214ENST00000513996 CHCHD1Q96BP2 118 aaKnown RBP5.31□□□□□ -1.56
HERC4-214ENST00000513996 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms