RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 C6orf226Q5I0X4 101 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 Q8IZM0 81 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 TMEM18Q96B42 140 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 C20orf166-AS1Q96NR2 134 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 LIMD2Q9BT23 127 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 NUDT15Q9NV35 164 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 TOMM7Q9P0U1 55 aa4.66□□□□□ -1.66
CLCN3-208ENST00000512813 MPC2O95563 127 aa4.65□□□□□ -1.67
CLCN3-208ENST00000512813 PET100P0DJ07 73 aa4.65□□□□□ -1.67
CLCN3-208ENST00000512813 NRACQ8N912 160 aa4.65□□□□□ -1.67
CLCN3-208ENST00000512813 VCYO14598 125 aa4.64□□□□□ -1.67
CLCN3-208ENST00000512813 NPSP0C0P6 89 aa4.64□□□□□ -1.67
CLCN3-208ENST00000512813 SPANXA1Q9NS26 97 aa4.64□□□□□ -1.67
CLCN3-208ENST00000512813 RPL39P62891 51 aaKnown RBP4.63□□□□□ -1.67
CLCN3-208ENST00000512813 Q6ZN92 141 aa4.63□□□□□ -1.67
CLCN3-208ENST00000512813 FAM19A3Q7Z5A8 133 aa4.63□□□□□ -1.67
CLCN3-208ENST00000512813 MAP1LC3B2A6NCE7 125 aa4.62□□□□□ -1.67
CLCN3-208ENST00000512813 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
CLCN3-208ENST00000512813 TMUB2Q71RG4 321 aa4.62□□□□□ -1.67
CLCN3-208ENST00000512813 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
CLCN3-208ENST00000512813 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
CLCN3-208ENST00000512813 MAP1LC3BQ9GZQ8 125 aa4.62□□□□□ -1.67
CLCN3-208ENST00000512813 PAGE4O60829 102 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 VPREB1P12018 145 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 SPRR2EP22531 72 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 S100A5P33763 92 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 SPRR2BP35325 72 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 SPRR2AP35326 72 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 RPL35P42766 123 aaKnown RBP4.61□□□□□ -1.67
CLCN3-208ENST00000512813 CXCL5P42830 114 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 H2BFSP57053 126 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 AKAP14Q86UN6 197 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
CLCN3-208ENST00000512813 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
CLCN3-208ENST00000512813 LYRM1O43325 122 aa4.6□□□□□ -1.67
CLCN3-208ENST00000512813 A6NN06 94 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 PLA2G10O15496 165 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 PFDN1O60925 122 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
CLCN3-208ENST00000512813 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 C6orf99Q4VX62 202 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 CENPWQ5EE01 88 aa4.59□□□□□ -1.67
CLCN3-208ENST00000512813 TRBV20-1A0A075B6N2 111 aa4.58□□□□□ -1.68
CLCN3-208ENST00000512813 ATP6V1G2O95670 118 aa4.58□□□□□ -1.68
CLCN3-208ENST00000512813 IL7P13232 177 aa4.58□□□□□ -1.68
CLCN3-208ENST00000512813 C9orf153Q5TBE3 101 aa4.58□□□□□ -1.68
CLCN3-208ENST00000512813 SMIM12Q96EX1 92 aa4.58□□□□□ -1.68
CLCN3-208ENST00000512813 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
CLCN3-208ENST00000512813 TRBV20OR9-2A0A075B6H5 130 aa4.56□□□□□ -1.68
CLCN3-208ENST00000512813 TCAPO15273 167 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 PPP1R17O96001 155 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 RAB4AP20338 218 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 C11orf52Q96A22 123 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 MED9Q9NWA0 146 aa4.55□□□□□ -1.68
CLCN3-208ENST00000512813 IGLV4-3A0A075B6K6 122 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 SMKR1H3BMG3 65 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 PPP1R2P9O14990 202 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 RAB5BP61020 215 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
CLCN3-208ENST00000512813 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
CLCN3-208ENST00000512813 NUDT10Q8NFP7 164 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 NUDT11Q96G61 164 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 TMEM191AQ9H0A3 160 aa4.54□□□□□ -1.68
CLCN3-208ENST00000512813 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
CLCN3-208ENST00000512813 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
CLCN3-208ENST00000512813 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
CLCN3-208ENST00000512813 Q8NDZ9 215 aa4.53□□□□□ -1.68
CLCN3-208ENST00000512813 TMEM141Q96I45 108 aa4.53□□□□□ -1.68
CLCN3-208ENST00000512813 BIN3Q9NQY0 253 aa4.53□□□□□ -1.68
CLCN3-208ENST00000512813 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 PRYO14603 147 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 SPRR1AP35321 89 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 GNG4P50150 75 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 PYGO1Q9Y3Y4 419 aa4.52□□□□□ -1.69
CLCN3-208ENST00000512813 NOL3O60936 208 aaKnown RBP4.51□□□□□ -1.69
CLCN3-208ENST00000512813 ERC2-IT1O76042 136 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 TAGLN2P37802 199 aaKnown RBP4.51□□□□□ -1.69
CLCN3-208ENST00000512813 CCL20P78556 96 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 RPL7L1Q6DKI1 246 aaKnown RBP4.51□□□□□ -1.69
CLCN3-208ENST00000512813 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 Q75L30 129 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 AMN1Q8IY45 258 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
CLCN3-208ENST00000512813 EIF5A2Q9GZV4 153 aaKnown RBP4.5□□□□□ -1.69
CLCN3-208ENST00000512813 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
CLCN3-208ENST00000512813 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
CLCN3-208ENST00000512813 FXYD6-FXYD2A0A087WZ82 144 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 ETDCA0A1B0GVM5 59 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 FAM240BA0A1B0GVZ2 78 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 RAB14P61106 215 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 KCNRGQ8N5I3 272 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 C20orf78Q9BR46 151 aa4.49□□□□□ -1.69
CLCN3-208ENST00000512813 BORCS7-ASMTA0A0B4J1R7 106 aa4.48□□□□□ -1.69
CLCN3-208ENST00000512813 A8MWL6 223 aa4.48□□□□□ -1.69
CLCN3-208ENST00000512813 C10orf91Q5T1B1 145 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms