RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RNF185Q96GF1 192 aa7.99□□□□□ -1.13
CPNE4-209ENST00000512055 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
CPNE4-209ENST00000512055 DEFB4AO15263 64 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 KRTAP10-9P60411 292 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 EDN2P20800 178 aa7.98□□□□□ -1.13
CPNE4-209ENST00000512055 CRIP2P52943 208 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-209ENST00000512055 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-209ENST00000512055 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-209ENST00000512055 NTM-AS1Q6ZSK4 140 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 MAP6D1Q9H9H5 199 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 FASNP49327 2511 aaKnown RBP7.97□□□□□ -1.13
CPNE4-209ENST00000512055 C18orf65Q6ZTR6 163 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 ACANP16112 2415 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 MUC4Q99102 2169 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
CPNE4-209ENST00000512055 Q9UF83 564 aa7.96□□□□□ -1.13
CPNE4-209ENST00000512055 MYO15AQ9UKN7 3530 aa7.96□□□□□ -1.13
CPNE4-209ENST00000512055 SPTBN5Q9NRC6 3674 aaKnown RBP7.96□□□□□ -1.14
CPNE4-209ENST00000512055 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
CPNE4-209ENST00000512055 ANKRD17O75179 2603 aaKnown RBP7.95□□□□□ -1.14
CPNE4-209ENST00000512055 UBE2D3P61077 147 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 REG3AQ06141 175 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 IGLV4-3A0A075B6K6 122 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
CPNE4-209ENST00000512055 ZNF702PQ9H963 129 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 Q6ZSV7 163 aa7.95□□□□□ -1.14
CPNE4-209ENST00000512055 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
CPNE4-209ENST00000512055 U3KQK5 164 aa7.94□□□□□ -1.14
CPNE4-209ENST00000512055 ZNF292O60281 2723 aa7.94□□□□□ -1.14
CPNE4-209ENST00000512055 PRM2P04554 102 aa7.94□□□□□ -1.14
CPNE4-209ENST00000512055 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
CPNE4-209ENST00000512055 DEFB114Q30KQ6 69 aa7.93□□□□□ -1.14
CPNE4-209ENST00000512055 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
CPNE4-209ENST00000512055 COL6A3P12111 3177 aa7.93□□□□□ -1.14
CPNE4-209ENST00000512055 H0Y9P7 68 aa7.92□□□□□ -1.14
CPNE4-209ENST00000512055 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
CPNE4-209ENST00000512055 PRO0255Q9UI72 69 aa7.92□□□□□ -1.14
CPNE4-209ENST00000512055 A0A1B0GU69 56 aa7.92□□□□□ -1.14
CPNE4-209ENST00000512055 C9orf66Q5T8R8 295 aa7.92□□□□□ -1.14
CPNE4-209ENST00000512055 PROK1P58294 105 aa7.91□□□□□ -1.14
CPNE4-209ENST00000512055 PSMG3-AS1Q96PY0 264 aa7.91□□□□□ -1.14
CPNE4-209ENST00000512055 HILS1P60008 231 aa7.91□□□□□ -1.14
CPNE4-209ENST00000512055 F8P00451 2351 aa7.91□□□□□ -1.14
CPNE4-209ENST00000512055 DEFB135Q30KP9 77 aa7.9□□□□□ -1.14
CPNE4-209ENST00000512055 Q6ZTI0 123 aa7.9□□□□□ -1.14
CPNE4-209ENST00000512055 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
CPNE4-209ENST00000512055 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.14
CPNE4-209ENST00000512055 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
CPNE4-209ENST00000512055 CENPEQ02224 2701 aa7.9□□□□□ -1.15
CPNE4-209ENST00000512055 FRYLO94915 3013 aa7.89□□□□□ -1.15
CPNE4-209ENST00000512055 KLLNB2CW77 178 aa7.89□□□□□ -1.15
CPNE4-209ENST00000512055 HCG22E2RYF7 251 aa7.89□□□□□ -1.15
CPNE4-209ENST00000512055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-209ENST00000512055 SSBP3-AS1Q7Z2R9 100 aa7.88□□□□□ -1.15
CPNE4-209ENST00000512055 BBC3Q96PG8 261 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-209ENST00000512055 M0QY20 66 aa7.88□□□□□ -1.15
CPNE4-209ENST00000512055 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
CPNE4-209ENST00000512055 CNFNQ9BYD5 112 aa7.88□□□□□ -1.15
CPNE4-209ENST00000512055 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 CD164Q04900 197 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 PRLHP81277 87 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 DSPP15924 2871 aaKnown RBP7.87□□□□□ -1.15
CPNE4-209ENST00000512055 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
CPNE4-209ENST00000512055 LOC100131303A0A0U1RQF7 123 aa7.86□□□□□ -1.15
CPNE4-209ENST00000512055 TRBV10-3A0A0K0K1G6 114 aa7.86□□□□□ -1.15
CPNE4-209ENST00000512055 M0R378 163 aa7.86□□□□□ -1.15
CPNE4-209ENST00000512055 INAFM1C9JVW0 142 aa7.85□□□□□ -1.15
CPNE4-209ENST00000512055 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
CPNE4-209ENST00000512055 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
CPNE4-209ENST00000512055 SYCNQ0VAF6 134 aa7.85□□□□□ -1.15
CPNE4-209ENST00000512055 C14orf177Q52M58 125 aa7.85□□□□□ -1.15
CPNE4-209ENST00000512055 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-209ENST00000512055 AKAP13Q12802 2813 aa7.84□□□□□ -1.15
CPNE4-209ENST00000512055 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
CPNE4-209ENST00000512055 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
CPNE4-209ENST00000512055 LINC00846Q9NV44 126 aa7.84□□□□□ -1.15
CPNE4-209ENST00000512055 USP34Q70CQ2 3546 aa7.84□□□□□ -1.15
CPNE4-209ENST00000512055 LY6G6CO95867 125 aa7.84□□□□□ -1.16
CPNE4-209ENST00000512055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.84□□□□□ -1.16
CPNE4-209ENST00000512055 SMR3AQ99954 134 aa7.83□□□□□ -1.16
CPNE4-209ENST00000512055 C1orf64Q8NEQ6 169 aa7.83□□□□□ -1.16
CPNE4-209ENST00000512055 A0A087WYN8 130 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 AGRNO00468 2067 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 IGLV8-61A0A075B6I0 122 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 A0A096LNJ9 63 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 TRAV10A0A0B4J240 114 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 Q8N814 137 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 F8WDY8 70 aa7.82□□□□□ -1.16
CPNE4-209ENST00000512055 POLR2KP53803 58 aaKnown RBP7.82□□□□□ -1.16
CPNE4-209ENST00000512055 COL27A1Q8IZC6 1860 aaPredicted RBP7.82□□□□□ -1.16
CPNE4-209ENST00000512055 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
CPNE4-209ENST00000512055 LINC00482Q8N8I6 264 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms