RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 LST1O00453 97 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 ATOX1O00244 68 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 GHRHP01286 108 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 LINC00158P58513 81 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 HAMPP81172 84 aa6.18□□□□□ -1.42
LIMCH1-209ENST00000509277 TRBV30A0A0K0K1B3 111 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 CDKN2A-AS1Q9UH64 79 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 PAX4O43316 350 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 DAD1P61803 113 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 Q9UF83 564 aa6.17□□□□□ -1.42
LIMCH1-209ENST00000509277 USP17L23D6RBM5 183 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 A0A0J9YWU9 116 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 LECT2O14960 151 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 SOSTDC1Q6X4U4 206 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
LIMCH1-209ENST00000509277 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
LIMCH1-209ENST00000509277 CELA1Q9UNI1 258 aa6.15□□□□□ -1.42
LIMCH1-209ENST00000509277 CRPP02741 224 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 C16orf74Q96GX8 76 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 SPANXA1Q9NS26 97 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 IGLV4-3A0A075B6K6 122 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 EGFEM1PQ0D2K5 195 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 ENHOQ6UWT2 76 aa6.15□□□□□ -1.43
LIMCH1-209ENST00000509277 RPL36AP83881 106 aaKnown RBP6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 LINC00336Q6ZUF6 198 aa6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 NANOS2P60321 138 aaKnown RBP6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 MIAQ16674 131 aa6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 X6R8D5 127 aa6.14□□□□□ -1.43
LIMCH1-209ENST00000509277 LOC100131303A0A0U1RQF7 123 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 MALP21145 153 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 CSNK1G2-AS1Q8NCQ2 148 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 OVOL2Q9BRP0 275 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 C20orf203Q8NBC4 194 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 OXTP01178 125 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 INAFM2P0DMQ5 153 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
LIMCH1-209ENST00000509277 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 COX8CQ7Z4L0 72 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 AMELXQ99217 191 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 SPART-AS1P0CW21 52 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 Q6ZSN1 163 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 C9orf85Q96MD7 179 aa6.12□□□□□ -1.43
LIMCH1-209ENST00000509277 COX7A2LO14548 114 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 ACYP1P07311 99 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 CXCL5P42830 114 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 WIPF1O43516 503 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 FHL2Q14192 279 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 Q6ZTC4 211 aa6.11□□□□□ -1.43
LIMCH1-209ENST00000509277 A8MTW9 85 aa6.1□□□□□ -1.43
LIMCH1-209ENST00000509277 C11orf45Q8TAV5 145 aa6.1□□□□□ -1.43
LIMCH1-209ENST00000509277 MIFP14174 115 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 TMEM258P61165 79 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 VSIG2Q96IQ7 327 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 C2orf48Q96LS8 159 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 A0A087WYN8 130 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 LAMTOR3Q9UHA4 124 aa6.09□□□□□ -1.43
LIMCH1-209ENST00000509277 GYPEP15421 78 aa6.09□□□□□ -1.44
LIMCH1-209ENST00000509277 Q8NAQ8 132 aa6.09□□□□□ -1.44
LIMCH1-209ENST00000509277 LINC00467Q9BRT7 94 aa6.09□□□□□ -1.44
LIMCH1-209ENST00000509277 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 M0QY20 66 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 FAM240AA0A1B0GVK7 77 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 PLAC8L1A1L4L8 177 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 SS18Q15532 418 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
LIMCH1-209ENST00000509277 LINC01546A6NGU7 62 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 C5orf38Q86SI9 138 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 RMI2Q96E14 147 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 IMUPQ9GZP8 106 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 ANK2Q01484 3957 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 COX6A2Q02221 97 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 V9GYY9 64 aa6.07□□□□□ -1.44
LIMCH1-209ENST00000509277 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
LIMCH1-209ENST00000509277 UBE2L6O14933 153 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms