RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
HMGXB3-202ENST00000503427 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
HMGXB3-202ENST00000503427 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
HMGXB3-202ENST00000503427 V9GYY9 64 aa11.56□□□□□ -0.56
HMGXB3-202ENST00000503427 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
HMGXB3-202ENST00000503427 Q8N2B8 174 aa11.55□□□□□ -0.56
HMGXB3-202ENST00000503427 FHL2Q14192 279 aa11.54□□□□□ -0.56
HMGXB3-202ENST00000503427 SPTSSBQ8NFR3 76 aa11.54□□□□□ -0.56
HMGXB3-202ENST00000503427 RPL37AP8A6NKH3 93 aa11.53□□□□□ -0.56
HMGXB3-202ENST00000503427 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-202ENST00000503427 WFDC13Q8IUB5 93 aa11.53□□□□□ -0.56
HMGXB3-202ENST00000503427 A0A087WYN8 130 aa11.52□□□□□ -0.56
HMGXB3-202ENST00000503427 LINC01546A6NGU7 62 aa11.52□□□□□ -0.56
HMGXB3-202ENST00000503427 M0QXV9 152 aa11.52□□□□□ -0.56
HMGXB3-202ENST00000503427 CASC2Q6XLA1 102 aa11.52□□□□□ -0.56
HMGXB3-202ENST00000503427 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
HMGXB3-202ENST00000503427 Q6ZSN1 163 aa11.52□□□□□ -0.57
HMGXB3-202ENST00000503427 PPDPFQ9H3Y8 114 aa11.51□□□□□ -0.57
HMGXB3-202ENST00000503427 ZNF706Q9Y5V0 76 aaPredicted RBP11.51□□□□□ -0.57
HMGXB3-202ENST00000503427 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
HMGXB3-202ENST00000503427 TRAV7A0A075B6U4 112 aa11.51□□□□□ -0.57
HMGXB3-202ENST00000503427 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
HMGXB3-202ENST00000503427 SVIPQ8NHG7 77 aa11.49□□□□□ -0.57
HMGXB3-202ENST00000503427 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
HMGXB3-202ENST00000503427 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
HMGXB3-202ENST00000503427 PRR3P79522 188 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-202ENST00000503427 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
HMGXB3-202ENST00000503427 A0A087WVE0 104 aa11.46□□□□□ -0.57
HMGXB3-202ENST00000503427 C7orf33Q8WU49 177 aa11.46□□□□□ -0.57
HMGXB3-202ENST00000503427 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
HMGXB3-202ENST00000503427 LINC01561Q8N1V8 128 aa11.45□□□□□ -0.58
HMGXB3-202ENST00000503427 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
HMGXB3-202ENST00000503427 RETNQ9HD89 108 aa11.45□□□□□ -0.58
HMGXB3-202ENST00000503427 SMIM26A0A096LP01 95 aa11.44□□□□□ -0.58
HMGXB3-202ENST00000503427 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
HMGXB3-202ENST00000503427 HECTD1Q9ULT8 2610 aa11.44□□□□□ -0.58
HMGXB3-202ENST00000503427 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
HMGXB3-202ENST00000503427 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
HMGXB3-202ENST00000503427 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
HMGXB3-202ENST00000503427 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
HMGXB3-202ENST00000503427 PTPRBP23467 1997 aa11.43□□□□□ -0.58
HMGXB3-202ENST00000503427 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
HMGXB3-202ENST00000503427 F8P00451 2351 aa11.42□□□□□ -0.58
HMGXB3-202ENST00000503427 PRR4Q16378 134 aa11.42□□□□□ -0.58
HMGXB3-202ENST00000503427 SPINK6Q6UWN8 80 aa11.42□□□□□ -0.58
HMGXB3-202ENST00000503427 Q6ZTC4 211 aa11.42□□□□□ -0.58
HMGXB3-202ENST00000503427 Q8N9L7 120 aa11.41□□□□□ -0.58
HMGXB3-202ENST00000503427 F8WDY8 70 aa11.41□□□□□ -0.58
HMGXB3-202ENST00000503427 LINC00315P59091 139 aa11.41□□□□□ -0.58
HMGXB3-202ENST00000503427 PRR15LQ9BU68 103 aa11.41□□□□□ -0.58
HMGXB3-202ENST00000503427 PCSK5Q92824 1860 aa11.41□□□□□ -0.58
HMGXB3-202ENST00000503427 FAM19A4Q96LR4 140 aa11.4□□□□□ -0.58
HMGXB3-202ENST00000503427 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
HMGXB3-202ENST00000503427 SERP1Q9Y6X1 66 aa11.4□□□□□ -0.58
HMGXB3-202ENST00000503427 ACANP16112 2415 aa11.4□□□□□ -0.58
HMGXB3-202ENST00000503427 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
HMGXB3-202ENST00000503427 M0R2N4 97 aa11.4□□□□□ -0.59
HMGXB3-202ENST00000503427 C10orf25Q5T742 122 aa11.39□□□□□ -0.59
HMGXB3-202ENST00000503427 C11orf72Q8NBR9 251 aa11.39□□□□□ -0.59
HMGXB3-202ENST00000503427 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
HMGXB3-202ENST00000503427 CDIP1Q9H305 208 aa11.39□□□□□ -0.59
HMGXB3-202ENST00000503427 Q8N3U1 123 aa11.39□□□□□ -0.59
HMGXB3-202ENST00000503427 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
HMGXB3-202ENST00000503427 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
HMGXB3-202ENST00000503427 IGLV9-49A0A0B4J1Y8 123 aa11.38□□□□□ -0.59
HMGXB3-202ENST00000503427 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
HMGXB3-202ENST00000503427 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
HMGXB3-202ENST00000503427 LINC00575Q6W349 94 aa11.37□□□□□ -0.59
HMGXB3-202ENST00000503427 AGRNO00468 2067 aa11.37□□□□□ -0.59
HMGXB3-202ENST00000503427 LY6G6CO95867 125 aa11.37□□□□□ -0.59
HMGXB3-202ENST00000503427 FHL3Q13643 280 aa11.37□□□□□ -0.59
HMGXB3-202ENST00000503427 LINC00846Q9NV44 126 aa11.36□□□□□ -0.59
HMGXB3-202ENST00000503427 ANKRD17O75179 2603 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-202ENST00000503427 TRBV7-7A0A0K0K1E9 115 aa11.35□□□□□ -0.59
HMGXB3-202ENST00000503427 A6NED7 52 aa11.35□□□□□ -0.59
HMGXB3-202ENST00000503427 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
HMGXB3-202ENST00000503427 PRYO14603 147 aa11.33□□□□□ -0.6
HMGXB3-202ENST00000503427 Q6ZVQ6 151 aa11.33□□□□□ -0.6
HMGXB3-202ENST00000503427 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
HMGXB3-202ENST00000503427 K7ERS5 55 aa11.32□□□□□ -0.6
HMGXB3-202ENST00000503427 IGHV3OR16-9A0A0B4J2B5 98 aa11.32□□□□□ -0.6
HMGXB3-202ENST00000503427 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
HMGXB3-202ENST00000503427 FSHBP01225 129 aa11.31□□□□□ -0.6
HMGXB3-202ENST00000503427 SMCPP49901 116 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-202ENST00000503427 COL27A1Q8IZC6 1860 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-202ENST00000503427 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
HMGXB3-202ENST00000503427 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
HMGXB3-202ENST00000503427 PRO0461Q9UI25 63 aa11.29□□□□□ -0.6
HMGXB3-202ENST00000503427 LINC01547P58512 204 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-202ENST00000503427 A8MTW9 85 aa11.28□□□□□ -0.6
HMGXB3-202ENST00000503427 Q6ZRU5 148 aa11.27□□□□□ -0.61
HMGXB3-202ENST00000503427 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-202ENST00000503427 CXCL6P80162 114 aa11.26□□□□□ -0.61
HMGXB3-202ENST00000503427 ESRGQ1W209 222 aa11.26□□□□□ -0.61
HMGXB3-202ENST00000503427 Q9BRP9 147 aa11.26□□□□□ -0.61
HMGXB3-202ENST00000503427 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
HMGXB3-202ENST00000503427 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
HMGXB3-202ENST00000503427 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
HMGXB3-202ENST00000503427 A0A087WSZ3 146 aa11.24□□□□□ -0.61
HMGXB3-202ENST00000503427 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms