RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PMVKQ15126 192 aa7.15□□□□□ -1.26
ERCC8-208ENST00000497892 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
ERCC8-208ENST00000497892 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.26
ERCC8-208ENST00000497892 CST9LQ9H4G1 147 aa7.15□□□□□ -1.26
ERCC8-208ENST00000497892 A0A0J9YXV3 536 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 COLCA2A8K830 154 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 KIAA0087Q14695 138 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 VPS13BQ7Z7G8 4022 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
ERCC8-208ENST00000497892 MRPL35Q9NZE8 188 aaKnown RBP7.14□□□□□ -1.27
ERCC8-208ENST00000497892 CDKN2A-AS1Q9UH64 79 aa7.14□□□□□ -1.27
ERCC8-208ENST00000497892 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 A0A087WYN8 130 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 IGKV2-24A0A0C4DH68 120 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 NDUFA1O15239 70 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 RNF151Q2KHN1 245 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
ERCC8-208ENST00000497892 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
ERCC8-208ENST00000497892 ATP5LO75964 103 aa7.12□□□□□ -1.27
ERCC8-208ENST00000497892 LINC00469Q8N7U9 141 aa7.12□□□□□ -1.27
ERCC8-208ENST00000497892 SCO1O75880 301 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 MAJINQ3KP22 176 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 C10orf25Q5T742 122 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 Q8IZM0 81 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 PACRGQ96M98 296 aaPredicted RBP7.11□□□□□ -1.27
ERCC8-208ENST00000497892 C6orf48Q9UBA6 75 aa7.11□□□□□ -1.27
ERCC8-208ENST00000497892 SMIM1B2RUZ4 78 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 HSBP1O75506 76 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
ERCC8-208ENST00000497892 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 STPG4Q8N801 248 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
ERCC8-208ENST00000497892 TRBV30A0A0K0K1B3 111 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 PRSS2P07478 247 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 NDUFA6P56556 154 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 RPL18AQ02543 176 aaKnown RBP7.09□□□□□ -1.27
ERCC8-208ENST00000497892 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
ERCC8-208ENST00000497892 SERF1AO75920 110 aa7.08□□□□□ -1.28
ERCC8-208ENST00000497892 CKS1BP61024 79 aa7.08□□□□□ -1.28
ERCC8-208ENST00000497892 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
ERCC8-208ENST00000497892 H3BRM9 83 aa7.07□□□□□ -1.28
ERCC8-208ENST00000497892 RPL37AP61513 92 aaKnown RBP7.07□□□□□ -1.28
ERCC8-208ENST00000497892 C6orf226Q5I0X4 101 aa7.07□□□□□ -1.28
ERCC8-208ENST00000497892 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
ERCC8-208ENST00000497892 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
ERCC8-208ENST00000497892 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 NDUFC2-KCTD14E9PQ53 114 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 F8VRH5 84 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 ZNF22P17026 224 aaPredicted RBP7.06□□□□□ -1.28
ERCC8-208ENST00000497892 CXCL5P42830 114 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 Q6ZRP5 223 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 COX7B2Q8TF08 81 aa7.06□□□□□ -1.28
ERCC8-208ENST00000497892 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
ERCC8-208ENST00000497892 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
ERCC8-208ENST00000497892 C7orf33Q8WU49 177 aa7.05□□□□□ -1.28
ERCC8-208ENST00000497892 CHTOPQ9Y3Y2 248 aaKnown RBP7.05□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BKO60814 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BJP06899 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BOP23527 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BBP33778 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BDP58876 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BCP62807 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST2H2BEQ16778 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BHQ93079 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BNQ99877 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 HIST1H2BMQ99879 126 aa7.04□□□□□ -1.28
ERCC8-208ENST00000497892 A0A1W2PNN7 141 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 C9orf118A6NHY6 69 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 NUPR1O60356 82 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 GAGE2EQ4V326 116 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 GAGE2DQ9UEU5 116 aa7.03□□□□□ -1.28
ERCC8-208ENST00000497892 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.28
ERCC8-208ENST00000497892 TMEM170BQ5T4T1 132 aa7.02□□□□□ -1.29
ERCC8-208ENST00000497892 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
ERCC8-208ENST00000497892 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
ERCC8-208ENST00000497892 ODF1Q14990 250 aa7.01□□□□□ -1.29
ERCC8-208ENST00000497892 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
ERCC8-208ENST00000497892 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
ERCC8-208ENST00000497892 ATP6V1G1O75348 118 aa7□□□□□ -1.29
ERCC8-208ENST00000497892 S100A1P23297 94 aa7□□□□□ -1.29
ERCC8-208ENST00000497892 HNRNPA3P51991 378 aaKnown RBP7□□□□□ -1.29
ERCC8-208ENST00000497892 CDIP1Q9H305 208 aa7□□□□□ -1.29
ERCC8-208ENST00000497892 TMEM223A0PJW6 202 aa6.99□□□□□ -1.29
ERCC8-208ENST00000497892 H0Y8G0 127 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms