RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 TINCRA0A1B0GVN0 87 aa12.86□□□□□ -0.35
COL9A2-211ENST00000496215 PMVKQ15126 192 aa12.86□□□□□ -0.35
COL9A2-211ENST00000496215 HMCN2Q8NDA2 5059 aa12.86□□□□□ -0.35
COL9A2-211ENST00000496215 C6orf226Q5I0X4 101 aa12.85□□□□□ -0.35
COL9A2-211ENST00000496215 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
COL9A2-211ENST00000496215 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
COL9A2-211ENST00000496215 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
COL9A2-211ENST00000496215 LINC00614P0C842 121 aa12.84□□□□□ -0.35
COL9A2-211ENST00000496215 GAGE2EQ4V326 116 aa12.84□□□□□ -0.35
COL9A2-211ENST00000496215 YPEL4Q96NS1 127 aa12.84□□□□□ -0.35
COL9A2-211ENST00000496215 GAGE2DQ9UEU5 116 aa12.84□□□□□ -0.35
COL9A2-211ENST00000496215 A0A096LNJ9 63 aa12.83□□□□□ -0.36
COL9A2-211ENST00000496215 HBDP02042 147 aa12.83□□□□□ -0.36
COL9A2-211ENST00000496215 RAB5BP61020 215 aa12.83□□□□□ -0.36
COL9A2-211ENST00000496215 IGLV5-45A0A087WSX0 123 aa12.82□□□□□ -0.36
COL9A2-211ENST00000496215 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
COL9A2-211ENST00000496215 CXCL5P42830 114 aa12.81□□□□□ -0.36
COL9A2-211ENST00000496215 PMCHL1Q16048 86 aa12.81□□□□□ -0.36
COL9A2-211ENST00000496215 FAM19A5Q7Z5A7 132 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-211ENST00000496215 CBLN2Q8IUK8 224 aa12.81□□□□□ -0.36
COL9A2-211ENST00000496215 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
COL9A2-211ENST00000496215 F8VRH5 84 aa12.8□□□□□ -0.36
COL9A2-211ENST00000496215 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
COL9A2-211ENST00000496215 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
COL9A2-211ENST00000496215 NDUFA6P56556 154 aa12.78□□□□□ -0.36
COL9A2-211ENST00000496215 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
COL9A2-211ENST00000496215 H3BRM9 83 aa12.77□□□□□ -0.37
COL9A2-211ENST00000496215 SPINK8P0C7L1 97 aa12.77□□□□□ -0.37
COL9A2-211ENST00000496215 ATP5LO75964 103 aa12.76□□□□□ -0.37
COL9A2-211ENST00000496215 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
COL9A2-211ENST00000496215 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
COL9A2-211ENST00000496215 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
COL9A2-211ENST00000496215 M0QXV9 152 aa12.75□□□□□ -0.37
COL9A2-211ENST00000496215 C9orf129Q5T035 196 aaKnown RBP12.75□□□□□ -0.37
COL9A2-211ENST00000496215 SPINK6Q6UWN8 80 aa12.75□□□□□ -0.37
COL9A2-211ENST00000496215 SLC7A5P1Q8MH63 180 aa12.75□□□□□ -0.37
COL9A2-211ENST00000496215 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
COL9A2-211ENST00000496215 TNXBP22105 4242 aa12.73□□□□□ -0.37
COL9A2-211ENST00000496215 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
COL9A2-211ENST00000496215 ZNF22P17026 224 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-211ENST00000496215 KRTAP7-1Q8IUC3 87 aa12.71□□□□□ -0.37
COL9A2-211ENST00000496215 UBE2BP63146 152 aa12.7□□□□□ -0.38
COL9A2-211ENST00000496215 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
COL9A2-211ENST00000496215 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
COL9A2-211ENST00000496215 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
COL9A2-211ENST00000496215 SRSF9Q13242 221 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL9A2-211ENST00000496215 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
COL9A2-211ENST00000496215 SERTAD4-AS1Q5TG53 156 aa12.68□□□□□ -0.38
COL9A2-211ENST00000496215 C11orf86A6NJI1 115 aa12.67□□□□□ -0.38
COL9A2-211ENST00000496215 HSBP1O75506 76 aa12.67□□□□□ -0.38
COL9A2-211ENST00000496215 TRGC2P03986 189 aa12.67□□□□□ -0.38
COL9A2-211ENST00000496215 KRTAP11-1Q8IUC1 163 aa12.66□□□□□ -0.38
COL9A2-211ENST00000496215 LINC01600Q96MT4 127 aa12.66□□□□□ -0.38
COL9A2-211ENST00000496215 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
COL9A2-211ENST00000496215 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.38
COL9A2-211ENST00000496215 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
COL9A2-211ENST00000496215 IGLV7-43P04211 117 aa12.64□□□□□ -0.39
COL9A2-211ENST00000496215 TRAV12-1A0A0B4J245 112 aa12.63□□□□□ -0.39
COL9A2-211ENST00000496215 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
COL9A2-211ENST00000496215 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-211ENST00000496215 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
COL9A2-211ENST00000496215 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
COL9A2-211ENST00000496215 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
COL9A2-211ENST00000496215 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
COL9A2-211ENST00000496215 SERF1AO75920 110 aa12.59□□□□□ -0.39
COL9A2-211ENST00000496215 ODF1Q14990 250 aa12.59□□□□□ -0.39
COL9A2-211ENST00000496215 MRPL55Q7Z7F7 128 aaKnown RBP12.59□□□□□ -0.39
COL9A2-211ENST00000496215 COLCA2A8K830 154 aa12.58□□□□□ -0.4
COL9A2-211ENST00000496215 PFN2P35080 140 aa12.58□□□□□ -0.4
COL9A2-211ENST00000496215 ERG28Q9UKR5 140 aa12.58□□□□□ -0.4
COL9A2-211ENST00000496215 LINC00310P59036 64 aa12.57□□□□□ -0.4
COL9A2-211ENST00000496215 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
COL9A2-211ENST00000496215 UBR4Q5T4S7 5183 aa12.56□□□□□ -0.4
COL9A2-211ENST00000496215 H0Y9J4 135 aa12.56□□□□□ -0.4
COL9A2-211ENST00000496215 LEPROTL1O95214 131 aa12.56□□□□□ -0.4
COL9A2-211ENST00000496215 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
COL9A2-211ENST00000496215 H0Y8G0 127 aa12.55□□□□□ -0.4
COL9A2-211ENST00000496215 NUPR1O60356 82 aa12.55□□□□□ -0.4
COL9A2-211ENST00000496215 NKAPP1Q8N9T2 125 aa12.55□□□□□ -0.4
COL9A2-211ENST00000496215 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
COL9A2-211ENST00000496215 COX17Q14061 63 aa12.54□□□□□ -0.4
COL9A2-211ENST00000496215 IGLV5-37A0A075B6J1 123 aa12.53□□□□□ -0.4
COL9A2-211ENST00000496215 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
COL9A2-211ENST00000496215 LINC00167Q96N53 147 aa12.51□□□□□ -0.41
COL9A2-211ENST00000496215 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
COL9A2-211ENST00000496215 HSPB8Q9UJY1 196 aa12.51□□□□□ -0.41
COL9A2-211ENST00000496215 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
COL9A2-211ENST00000496215 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
COL9A2-211ENST00000496215 SCO1O75880 301 aa12.48□□□□□ -0.41
COL9A2-211ENST00000496215 PLNP26678 52 aa12.48□□□□□ -0.41
COL9A2-211ENST00000496215 ZNF861PO60384 105 aa12.47□□□□□ -0.41
COL9A2-211ENST00000496215 BCE1O60756 84 aa12.47□□□□□ -0.41
COL9A2-211ENST00000496215 FABP4P15090 132 aa12.47□□□□□ -0.41
COL9A2-211ENST00000496215 VPREB1P12018 145 aa12.45□□□□□ -0.42
COL9A2-211ENST00000496215 LINC00158P58513 81 aa12.45□□□□□ -0.42
COL9A2-211ENST00000496215 RPL24P83731 157 aaKnown RBP12.45□□□□□ -0.42
COL9A2-211ENST00000496215 IGKV2-28A0A075B6P5 120 aa12.44□□□□□ -0.42
COL9A2-211ENST00000496215 IGKV2D-28P01615 120 aa12.44□□□□□ -0.42
COL9A2-211ENST00000496215 RPL28P46779 137 aaKnown RBP12.44□□□□□ -0.42
COL9A2-211ENST00000496215 A0A0U1RRA0 63 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms