RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 HSBP1O75506 76 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 S100A6P06703 90 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 ESDP10768 282 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 RPL39P62891 51 aaKnown RBP4.16□□□□□ -1.74
VIM-207ENST00000495528 WFDC2Q14508 124 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 ORMDL2Q53FV1 153 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 LINC01556Q5JQF7 62 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 LELP1Q5T871 98 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 CHCHD1Q96BP2 118 aaKnown RBP4.16□□□□□ -1.74
VIM-207ENST00000495528 TMEM243Q9BU79 118 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 CHCHD7Q9BUK0 85 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 FAT3Q8TDW7 4589 aa4.15□□□□□ -1.74
VIM-207ENST00000495528 LINC01546A6NGU7 62 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 K7EMI3 77 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 FABP4P15090 132 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 G0S2P27469 103 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 Q6ZSA8 131 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 C20orf203Q8NBC4 194 aa4.15□□□□□ -1.75
VIM-207ENST00000495528 FGF6P10767 208 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 KRTAP10-4P60372 401 aaPredicted RBP4.14□□□□□ -1.75
VIM-207ENST00000495528 LINC00242Q5T6M2 205 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 AMMECR1LQ6DCA0 310 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 C2orf66Q6UXQ4 117 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 SCGB3A1Q96QR1 104 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 CYSLTR1Q9Y271 337 aa4.14□□□□□ -1.75
VIM-207ENST00000495528 IGLV4-60A0A075B6I1 120 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.13□□□□□ -1.75
VIM-207ENST00000495528 A0A087WX48 190 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 LECT2O14960 151 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 HBDP02042 147 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 RBX1P62877 108 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 LINC01620Q4KN68 170 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 COA6Q5JTJ3 125 aaKnown RBP4.13□□□□□ -1.75
VIM-207ENST00000495528 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 SCXQ7RTU7 201 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 Q8N976 141 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 TMEM101Q96IK0 257 aa4.13□□□□□ -1.75
VIM-207ENST00000495528 A0A096LNJ9 63 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 IGIPA6NJ69 53 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 LEPROTL1O95214 131 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 OXTP01178 125 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 ANGP03950 147 aaKnown RBP4.12□□□□□ -1.75
VIM-207ENST00000495528 S100A2P29034 98 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 SMAGPQ0VAQ4 97 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 MPV17L2Q567V2 206 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
VIM-207ENST00000495528 ERASQ7Z444 233 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 HIST3H2BBQ8N257 126 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 OR5A1Q8NGJ0 315 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 KLK12Q9UKR0 248 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 UBE2D4Q9Y2X8 147 aa4.12□□□□□ -1.75
VIM-207ENST00000495528 IGKV3OR2-268A0A0C4DH90 116 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.11□□□□□ -1.75
VIM-207ENST00000495528 PKIAP61925 76 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 MRPL52Q86TS9 123 aaKnown RBP4.11□□□□□ -1.75
VIM-207ENST00000495528 LINC00269Q8N2A0 174 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 BAALCQ8WXS3 180 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 FAM104AQ969W3 186 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 TIMM21Q9BVV7 248 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 VCX2Q9H322 139 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 CDC42SE2Q9NRR3 84 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
VIM-207ENST00000495528 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 H0Y8G0 127 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 ATP5LO75964 103 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 ZNF25P17030 456 aaPredicted RBP4.1□□□□□ -1.75
VIM-207ENST00000495528 CLPSL2Q6UWE3 100 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 Q6ZN92 141 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 CHAC1Q9BUX1 264 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 HSPB8Q9UJY1 196 aa4.1□□□□□ -1.75
VIM-207ENST00000495528 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
VIM-207ENST00000495528 TRAV8-3A0A0A6YYJ7 113 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 TRAV13-1A0A0B4J241 112 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 KRTDAPP60985 99 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 MRPS36P82909 103 aaKnown RBP4.09□□□□□ -1.75
VIM-207ENST00000495528 REG3AQ06141 175 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 PMVKQ15126 192 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 ENHOQ6UWT2 76 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 TEX43Q6ZNM6 134 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 Q6ZUT4 128 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 TIMM17AQ99595 171 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 HIST1H2BLQ99880 126 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 MAP1LC3CQ9BXW4 147 aa4.09□□□□□ -1.75
VIM-207ENST00000495528 IGLV10-54A0A075B6I4 117 aa4.08□□□□□ -1.76
VIM-207ENST00000495528 A0A0J9YXV3 536 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms