RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 BORCS7Q96B45 105 aa7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 A0A1B0GUT8 65 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 A8MWL6 223 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 PPP1R2P9O14990 202 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 PDE6DO43924 150 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 PPP1R17O96001 155 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 ALKBH7Q9BT30 221 aaPredicted RBP7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 HIGD2AQ9BW72 106 aa7.4□□□□□ -1.22
EXOSC3-207ENST00000490516 F8VRH5 84 aa7.39□□□□□ -1.23
EXOSC3-207ENST00000490516 Q6ZN92 141 aa7.39□□□□□ -1.23
EXOSC3-207ENST00000490516 LINC00299Q6ZSB3 139 aa7.38□□□□□ -1.23
EXOSC3-207ENST00000490516 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
EXOSC3-207ENST00000490516 M0R378 163 aa7.37□□□□□ -1.23
EXOSC3-207ENST00000490516 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
EXOSC3-207ENST00000490516 HIGD1CA8MV81 97 aa7.36□□□□□ -1.23
EXOSC3-207ENST00000490516 TCAPO15273 167 aa7.36□□□□□ -1.23
EXOSC3-207ENST00000490516 SLC25A20O43772 301 aa7.36□□□□□ -1.23
EXOSC3-207ENST00000490516 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
EXOSC3-207ENST00000490516 IFI27P40305 119 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-207ENST00000490516 MRPL51Q4U2R6 128 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-207ENST00000490516 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
EXOSC3-207ENST00000490516 CFC1P0CG37 223 aa7.34□□□□□ -1.23
EXOSC3-207ENST00000490516 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-207ENST00000490516 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
EXOSC3-207ENST00000490516 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
EXOSC3-207ENST00000490516 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
EXOSC3-207ENST00000490516 TEX43Q6ZNM6 134 aa7.33□□□□□ -1.24
EXOSC3-207ENST00000490516 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 RAB5BP61020 215 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 CT83Q5H943 113 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 PYGO1Q9Y3Y4 419 aa7.32□□□□□ -1.24
EXOSC3-207ENST00000490516 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
EXOSC3-207ENST00000490516 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
EXOSC3-207ENST00000490516 C2orf88Q9BSF0 95 aa7.3□□□□□ -1.24
EXOSC3-207ENST00000490516 SMLR1H3BR10 107 aa7.29□□□□□ -1.24
EXOSC3-207ENST00000490516 CKS2P33552 79 aa7.29□□□□□ -1.24
EXOSC3-207ENST00000490516 CXCL5P42830 114 aa7.29□□□□□ -1.24
EXOSC3-207ENST00000490516 RIGQ13278 110 aa7.29□□□□□ -1.24
EXOSC3-207ENST00000490516 CDKN2A-AS1Q9UH64 79 aa7.29□□□□□ -1.24
EXOSC3-207ENST00000490516 LINC00862A6NCI5 91 aa7.28□□□□□ -1.24
EXOSC3-207ENST00000490516 VPREB1P12018 145 aa7.28□□□□□ -1.24
EXOSC3-207ENST00000490516 MOBPQ13875 183 aa7.28□□□□□ -1.24
EXOSC3-207ENST00000490516 NDUFA13Q9P0J0 144 aa7.28□□□□□ -1.24
EXOSC3-207ENST00000490516 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
EXOSC3-207ENST00000490516 TEX46H3BTG2 121 aa7.27□□□□□ -1.25
EXOSC3-207ENST00000490516 NPYP01303 97 aa7.27□□□□□ -1.25
EXOSC3-207ENST00000490516 ZNF345Q14585 488 aa7.26□□□□□ -1.25
EXOSC3-207ENST00000490516 AMELXQ99217 191 aa7.26□□□□□ -1.25
EXOSC3-207ENST00000490516 GEMIN7Q9H840 131 aaKnown RBP7.26□□□□□ -1.25
EXOSC3-207ENST00000490516 D6R8Y8 96 aa7.25□□□□□ -1.25
EXOSC3-207ENST00000490516 C2orf66Q6UXQ4 117 aa7.25□□□□□ -1.25
EXOSC3-207ENST00000490516 FAM19A3Q7Z5A8 133 aa7.25□□□□□ -1.25
EXOSC3-207ENST00000490516 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
EXOSC3-207ENST00000490516 VCX2Q9H322 139 aa7.25□□□□□ -1.25
EXOSC3-207ENST00000490516 KANTRA0A1W2PQU2 76 aa7.24□□□□□ -1.25
EXOSC3-207ENST00000490516 RAB5AP20339 215 aa7.24□□□□□ -1.25
EXOSC3-207ENST00000490516 Q8NDZ9 215 aa7.24□□□□□ -1.25
EXOSC3-207ENST00000490516 COX7B2Q8TF08 81 aa7.24□□□□□ -1.25
EXOSC3-207ENST00000490516 HERVK_113P63121 156 aa7.23□□□□□ -1.25
EXOSC3-207ENST00000490516 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
EXOSC3-207ENST00000490516 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
EXOSC3-207ENST00000490516 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
EXOSC3-207ENST00000490516 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
EXOSC3-207ENST00000490516 SMIM1B2RUZ4 78 aa7.22□□□□□ -1.25
EXOSC3-207ENST00000490516 PFN2P35080 140 aa7.21□□□□□ -1.26
EXOSC3-207ENST00000490516 RAB14P61106 215 aa7.21□□□□□ -1.26
EXOSC3-207ENST00000490516 GAGE2AQ6NT46 116 aa7.21□□□□□ -1.26
EXOSC3-207ENST00000490516 Q6Q795 121 aa7.21□□□□□ -1.26
EXOSC3-207ENST00000490516 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
EXOSC3-207ENST00000490516 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
EXOSC3-207ENST00000490516 OSTCQ9NRP0 149 aa7.2□□□□□ -1.26
EXOSC3-207ENST00000490516 V9GYV3 84 aa7.2□□□□□ -1.26
EXOSC3-207ENST00000490516 CEBPGP53567 150 aa7.19□□□□□ -1.26
EXOSC3-207ENST00000490516 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
EXOSC3-207ENST00000490516 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 TAGLN2P37802 199 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 SEC11AP67812 179 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 TIMM17AQ99595 171 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 NAT8BQ9UHF3 227 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 CYSLTR1Q9Y271 337 aa7.18□□□□□ -1.26
EXOSC3-207ENST00000490516 LOC389332A0A1B0GUA5 103 aa7.17□□□□□ -1.26
EXOSC3-207ENST00000490516 TMEM250H0YL14 139 aa7.17□□□□□ -1.26
EXOSC3-207ENST00000490516 IGIPA6NJ69 53 aa7.16□□□□□ -1.26
EXOSC3-207ENST00000490516 HMSDA8MTL9 139 aa7.16□□□□□ -1.26
EXOSC3-207ENST00000490516 NPSP0C0P6 89 aa7.16□□□□□ -1.26
EXOSC3-207ENST00000490516 NEBP20929 6669 aa7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 ATP5LO75964 103 aa7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 MT2AP02795 61 aa7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 FAM74A3Q4VXF1 159 aa7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 BATF3Q9NR55 127 aa7.15□□□□□ -1.26
EXOSC3-207ENST00000490516 SPINK8P0C7L1 97 aa7.14□□□□□ -1.27
EXOSC3-207ENST00000490516 SMIM7Q9BQ49 75 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms