RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 NDUFC2-KCTD14E9PQ53 114 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BKO60814 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BJP06899 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BOP23527 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BBP33778 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BDP58876 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BCP62807 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST2H2BEQ16778 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.74□□□□□ -0.69
YIPF3-208ENST00000490447 C18orf32Q8TCD1 76 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BHQ93079 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BNQ99877 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 HIST1H2BMQ99879 126 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 C2orf88Q9BSF0 95 aa10.74□□□□□ -0.69
YIPF3-208ENST00000490447 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
YIPF3-208ENST00000490447 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
YIPF3-208ENST00000490447 Q6ZN92 141 aa10.73□□□□□ -0.69
YIPF3-208ENST00000490447 PRSS2P07478 247 aa10.72□□□□□ -0.69
YIPF3-208ENST00000490447 LOC389332A0A1B0GUA5 103 aa10.71□□□□□ -0.69
YIPF3-208ENST00000490447 K7EMI3 77 aa10.71□□□□□ -0.69
YIPF3-208ENST00000490447 RPL13AP40429 203 aaKnown RBP10.71□□□□□ -0.69
YIPF3-208ENST00000490447 BAGE3Q86Y29 109 aa10.71□□□□□ -0.69
YIPF3-208ENST00000490447 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.69
YIPF3-208ENST00000490447 Q8N8P6 123 aa10.71□□□□□ -0.69
YIPF3-208ENST00000490447 KRTAP1-4P0C5Y4 121 aa10.7□□□□□ -0.7
YIPF3-208ENST00000490447 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
YIPF3-208ENST00000490447 LINC01561Q8N1V8 128 aa10.7□□□□□ -0.7
YIPF3-208ENST00000490447 CKS1BP61024 79 aa10.69□□□□□ -0.7
YIPF3-208ENST00000490447 FA2HQ7L5A8 372 aa10.69□□□□□ -0.7
YIPF3-208ENST00000490447 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
YIPF3-208ENST00000490447 CYSLTR1Q9Y271 337 aa10.69□□□□□ -0.7
YIPF3-208ENST00000490447 LINC00614P0C842 121 aa10.68□□□□□ -0.7
YIPF3-208ENST00000490447 CHCHD1Q96BP2 118 aaKnown RBP10.68□□□□□ -0.7
YIPF3-208ENST00000490447 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 S100A6P06703 90 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 NDUFA6P56556 154 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 PRR4Q16378 134 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 C6orf226Q5I0X4 101 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
YIPF3-208ENST00000490447 C2orf66Q6UXQ4 117 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 VCX2Q9H322 139 aa10.67□□□□□ -0.7
YIPF3-208ENST00000490447 G0S2P27469 103 aa10.66□□□□□ -0.7
YIPF3-208ENST00000490447 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
YIPF3-208ENST00000490447 NUPR1O60356 82 aa10.65□□□□□ -0.7
YIPF3-208ENST00000490447 ZNF861PO60384 105 aa10.65□□□□□ -0.7
YIPF3-208ENST00000490447 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
YIPF3-208ENST00000490447 SERF1AO75920 110 aa10.64□□□□□ -0.71
YIPF3-208ENST00000490447 LBHQ53QV2 105 aaPredicted RBP10.64□□□□□ -0.71
YIPF3-208ENST00000490447 ZC2HC1BQ5TFG8 222 aa10.64□□□□□ -0.71
YIPF3-208ENST00000490447 Q8IZM0 81 aa10.64□□□□□ -0.71
YIPF3-208ENST00000490447 AMELXQ99217 191 aa10.64□□□□□ -0.71
YIPF3-208ENST00000490447 LINC01549A6NIU2 74 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 HSBP1O75506 76 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 NPSP0C0P6 89 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 LINC00173Q6ZV60 143 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
YIPF3-208ENST00000490447 HERVK_113P63121 156 aa10.62□□□□□ -0.71
YIPF3-208ENST00000490447 XAGE1AQ9HD64 81 aa10.62□□□□□ -0.71
YIPF3-208ENST00000490447 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
YIPF3-208ENST00000490447 MUC2Q02817 5179 aa10.62□□□□□ -0.71
YIPF3-208ENST00000490447 SEC11AP67812 179 aa10.61□□□□□ -0.71
YIPF3-208ENST00000490447 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
YIPF3-208ENST00000490447 LINC00310P59036 64 aa10.6□□□□□ -0.71
YIPF3-208ENST00000490447 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
YIPF3-208ENST00000490447 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
YIPF3-208ENST00000490447 F8VRH5 84 aa10.59□□□□□ -0.71
YIPF3-208ENST00000490447 IGIPA6NJ69 53 aa10.58□□□□□ -0.71
YIPF3-208ENST00000490447 HBDP02042 147 aa10.58□□□□□ -0.71
YIPF3-208ENST00000490447 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.71
YIPF3-208ENST00000490447 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.71
YIPF3-208ENST00000490447 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
YIPF3-208ENST00000490447 CXCL5P42830 114 aa10.58□□□□□ -0.72
YIPF3-208ENST00000490447 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
YIPF3-208ENST00000490447 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
YIPF3-208ENST00000490447 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
YIPF3-208ENST00000490447 TSPAN13O95857 204 aa10.57□□□□□ -0.72
YIPF3-208ENST00000490447 S100A2P29034 98 aa10.57□□□□□ -0.72
YIPF3-208ENST00000490447 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
YIPF3-208ENST00000490447 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
YIPF3-208ENST00000490447 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
YIPF3-208ENST00000490447 A0A0U1RQV1 116 aa10.55□□□□□ -0.72
YIPF3-208ENST00000490447 BCE1O60756 84 aa10.55□□□□□ -0.72
YIPF3-208ENST00000490447 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
YIPF3-208ENST00000490447 HIST3H2BBQ8N257 126 aa10.55□□□□□ -0.72
YIPF3-208ENST00000490447 A0A096LNJ9 63 aa10.54□□□□□ -0.72
YIPF3-208ENST00000490447 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
YIPF3-208ENST00000490447 ATP5LO75964 103 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 CRYGAP11844 174 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 ERASQ7Z444 233 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 SCGB3A1Q96QR1 104 aa10.53□□□□□ -0.72
YIPF3-208ENST00000490447 A0A087X002 238 aa10.51□□□□□ -0.73
YIPF3-208ENST00000490447 RPL37AP8A6NKH3 93 aa10.51□□□□□ -0.73
YIPF3-208ENST00000490447 COX7B2Q8TF08 81 aa10.51□□□□□ -0.73
YIPF3-208ENST00000490447 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms