RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 C2orf82Q6UX34 121 aa7.69□□□□□ -1.18
ITSN1-229ENST00000487427 PACRGQ96M98 296 aaPredicted RBP7.69□□□□□ -1.18
ITSN1-229ENST00000487427 SCGB3A1Q96QR1 104 aa7.69□□□□□ -1.18
ITSN1-229ENST00000487427 CARHSP1Q9Y2V2 147 aaKnown RBP7.69□□□□□ -1.18
ITSN1-229ENST00000487427 LINC01546A6NGU7 62 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 MT-ND6P03923 174 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 RHEBQ15382 184 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
ITSN1-229ENST00000487427 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
ITSN1-229ENST00000487427 RPS10P5Q9NQ39 176 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
ITSN1-229ENST00000487427 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
ITSN1-229ENST00000487427 CKS1BP61024 79 aa7.67□□□□□ -1.18
ITSN1-229ENST00000487427 FABP9Q0Z7S8 132 aa7.67□□□□□ -1.18
ITSN1-229ENST00000487427 TOMM7Q9P0U1 55 aa7.67□□□□□ -1.18
ITSN1-229ENST00000487427 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
ITSN1-229ENST00000487427 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
ITSN1-229ENST00000487427 Q8IZM0 81 aa7.66□□□□□ -1.18
ITSN1-229ENST00000487427 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
ITSN1-229ENST00000487427 FA2HQ7L5A8 372 aa7.65□□□□□ -1.18
ITSN1-229ENST00000487427 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
ITSN1-229ENST00000487427 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
ITSN1-229ENST00000487427 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
ITSN1-229ENST00000487427 SMCO4Q9NRQ5 59 aa7.64□□□□□ -1.19
ITSN1-229ENST00000487427 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
ITSN1-229ENST00000487427 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
ITSN1-229ENST00000487427 LINC00469Q8N7U9 141 aa7.63□□□□□ -1.19
ITSN1-229ENST00000487427 F8VRH5 84 aa7.62□□□□□ -1.19
ITSN1-229ENST00000487427 PMVKQ15126 192 aa7.62□□□□□ -1.19
ITSN1-229ENST00000487427 PDZD11Q5EBL8 140 aa7.62□□□□□ -1.19
ITSN1-229ENST00000487427 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
ITSN1-229ENST00000487427 XP32Q5T750 250 aa7.62□□□□□ -1.19
ITSN1-229ENST00000487427 IGLV5-45A0A087WSX0 123 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 M0QXV9 152 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 IGLV7-43P04211 117 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 CXCL5P42830 114 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
ITSN1-229ENST00000487427 SNAPINO95295 136 aa7.6□□□□□ -1.19
ITSN1-229ENST00000487427 APOC3P02656 99 aa7.6□□□□□ -1.19
ITSN1-229ENST00000487427 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
ITSN1-229ENST00000487427 SVBPQ8N300 66 aa7.6□□□□□ -1.19
ITSN1-229ENST00000487427 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
ITSN1-229ENST00000487427 LINC00614P0C842 121 aa7.59□□□□□ -1.19
ITSN1-229ENST00000487427 UBE2BP63146 152 aa7.59□□□□□ -1.19
ITSN1-229ENST00000487427 C18orf32Q8TCD1 76 aa7.59□□□□□ -1.19
ITSN1-229ENST00000487427 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
ITSN1-229ENST00000487427 ODF1Q14990 250 aa7.58□□□□□ -1.2
ITSN1-229ENST00000487427 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
ITSN1-229ENST00000487427 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
ITSN1-229ENST00000487427 A0A096LNJ9 63 aa7.57□□□□□ -1.2
ITSN1-229ENST00000487427 H3BRM9 83 aa7.57□□□□□ -1.2
ITSN1-229ENST00000487427 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
ITSN1-229ENST00000487427 C22orf24Q9Y442 160 aa7.57□□□□□ -1.2
ITSN1-229ENST00000487427 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
ITSN1-229ENST00000487427 NDUFA6P56556 154 aa7.56□□□□□ -1.2
ITSN1-229ENST00000487427 RAB5BP61020 215 aa7.56□□□□□ -1.2
ITSN1-229ENST00000487427 LBHQ53QV2 105 aaPredicted RBP7.56□□□□□ -1.2
ITSN1-229ENST00000487427 H0Y9J4 135 aa7.55□□□□□ -1.2
ITSN1-229ENST00000487427 HBDP02042 147 aa7.55□□□□□ -1.2
ITSN1-229ENST00000487427 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
ITSN1-229ENST00000487427 TP73-AS1Q9UF72 201 aa7.55□□□□□ -1.2
ITSN1-229ENST00000487427 ATP5LO75964 103 aa7.54□□□□□ -1.2
ITSN1-229ENST00000487427 PMCHL1Q16048 86 aa7.54□□□□□ -1.2
ITSN1-229ENST00000487427 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
ITSN1-229ENST00000487427 MRPL55Q7Z7F7 128 aaKnown RBP7.53□□□□□ -1.2
ITSN1-229ENST00000487427 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
ITSN1-229ENST00000487427 NUPR1O60356 82 aa7.52□□□□□ -1.21
ITSN1-229ENST00000487427 ZNF22P17026 224 aaPredicted RBP7.52□□□□□ -1.21
ITSN1-229ENST00000487427 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
ITSN1-229ENST00000487427 ZNF861PO60384 105 aa7.51□□□□□ -1.21
ITSN1-229ENST00000487427 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
ITSN1-229ENST00000487427 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
ITSN1-229ENST00000487427 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
ITSN1-229ENST00000487427 TNXBP22105 4242 aa7.5□□□□□ -1.21
ITSN1-229ENST00000487427 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
ITSN1-229ENST00000487427 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
ITSN1-229ENST00000487427 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
ITSN1-229ENST00000487427 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
ITSN1-229ENST00000487427 RPL37AP8A6NKH3 93 aa7.48□□□□□ -1.21
ITSN1-229ENST00000487427 PFN2P35080 140 aa7.48□□□□□ -1.21
ITSN1-229ENST00000487427 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
ITSN1-229ENST00000487427 BCE1O60756 84 aa7.47□□□□□ -1.21
ITSN1-229ENST00000487427 RPL28P46779 137 aaKnown RBP7.47□□□□□ -1.21
ITSN1-229ENST00000487427 COX17Q14061 63 aa7.47□□□□□ -1.21
ITSN1-229ENST00000487427 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
ITSN1-229ENST00000487427 NKAPP1Q8N9T2 125 aa7.47□□□□□ -1.21
ITSN1-229ENST00000487427 IFI27L1Q96BM0 104 aa7.47□□□□□ -1.21
ITSN1-229ENST00000487427 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
ITSN1-229ENST00000487427 GAGE10A6NGK3 116 aa7.46□□□□□ -1.22
ITSN1-229ENST00000487427 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.22
ITSN1-229ENST00000487427 ERG28Q9UKR5 140 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms