RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 SEC11AP67812 179 aa12.78□□□□□ -0.36
PTPN18-211ENST00000481492 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
PTPN18-211ENST00000481492 CBLN2Q8IUK8 224 aa12.78□□□□□ -0.36
PTPN18-211ENST00000481492 GEMIN7Q9H840 131 aaKnown RBP12.78□□□□□ -0.36
PTPN18-211ENST00000481492 TINCRA0A1B0GVN0 87 aa12.77□□□□□ -0.37
PTPN18-211ENST00000481492 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
PTPN18-211ENST00000481492 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.37
PTPN18-211ENST00000481492 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
PTPN18-211ENST00000481492 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
PTPN18-211ENST00000481492 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
PTPN18-211ENST00000481492 PMVKQ15126 192 aa12.76□□□□□ -0.37
PTPN18-211ENST00000481492 TRBV30A0A0K0K1B3 111 aa12.75□□□□□ -0.37
PTPN18-211ENST00000481492 Q8IZM0 81 aa12.75□□□□□ -0.37
PTPN18-211ENST00000481492 SMIM1B2RUZ4 78 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 GAGE2EQ4V326 116 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 PDZD11Q5EBL8 140 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 GAGE2DQ9UEU5 116 aa12.74□□□□□ -0.37
PTPN18-211ENST00000481492 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
PTPN18-211ENST00000481492 PRSS2P07478 247 aa12.72□□□□□ -0.37
PTPN18-211ENST00000481492 PACRGQ96M98 296 aaPredicted RBP12.72□□□□□ -0.37
PTPN18-211ENST00000481492 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.37
PTPN18-211ENST00000481492 HBDP02042 147 aa12.71□□□□□ -0.37
PTPN18-211ENST00000481492 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.37
PTPN18-211ENST00000481492 MT1HL1P0DM35 61 aa12.7□□□□□ -0.38
PTPN18-211ENST00000481492 CKS1BP61024 79 aa12.7□□□□□ -0.38
PTPN18-211ENST00000481492 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPN18-211ENST00000481492 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
PTPN18-211ENST00000481492 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
PTPN18-211ENST00000481492 RAB5BP61020 215 aa12.69□□□□□ -0.38
PTPN18-211ENST00000481492 PSORS1C2Q9UIG4 136 aa12.69□□□□□ -0.38
PTPN18-211ENST00000481492 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
PTPN18-211ENST00000481492 F8VRH5 84 aa12.67□□□□□ -0.38
PTPN18-211ENST00000481492 NDUFA6P56556 154 aa12.67□□□□□ -0.38
PTPN18-211ENST00000481492 FAM19A5Q7Z5A7 132 aaPredicted RBP12.67□□□□□ -0.38
PTPN18-211ENST00000481492 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
PTPN18-211ENST00000481492 TRGC2P03986 189 aa12.65□□□□□ -0.38
PTPN18-211ENST00000481492 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
PTPN18-211ENST00000481492 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
PTPN18-211ENST00000481492 ATP5LO75964 103 aa12.63□□□□□ -0.39
PTPN18-211ENST00000481492 BAGE3Q86Y29 109 aa12.63□□□□□ -0.39
PTPN18-211ENST00000481492 XAGE1AQ9HD64 81 aa12.63□□□□□ -0.39
PTPN18-211ENST00000481492 IGLV5-39A0A0G2JS06 123 aa12.62□□□□□ -0.39
PTPN18-211ENST00000481492 COLCA2A8K830 154 aa12.62□□□□□ -0.39
PTPN18-211ENST00000481492 CXCL5P42830 114 aa12.62□□□□□ -0.39
PTPN18-211ENST00000481492 SERTAD4-AS1Q5TG53 156 aa12.62□□□□□ -0.39
PTPN18-211ENST00000481492 SPINK6Q6UWN8 80 aa12.62□□□□□ -0.39
PTPN18-211ENST00000481492 C11orf86A6NJI1 115 aa12.61□□□□□ -0.39
PTPN18-211ENST00000481492 LINC00310P59036 64 aa12.61□□□□□ -0.39
PTPN18-211ENST00000481492 TNXBP22105 4242 aa12.6□□□□□ -0.39
PTPN18-211ENST00000481492 H3BRM9 83 aa12.59□□□□□ -0.39
PTPN18-211ENST00000481492 M0QXV9 152 aa12.59□□□□□ -0.39
PTPN18-211ENST00000481492 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
PTPN18-211ENST00000481492 C1orf137Q5JT78 98 aa12.58□□□□□ -0.4
PTPN18-211ENST00000481492 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
PTPN18-211ENST00000481492 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
PTPN18-211ENST00000481492 NUPR1O60356 82 aa12.56□□□□□ -0.4
PTPN18-211ENST00000481492 CHTOPQ9Y3Y2 248 aaKnown RBP12.56□□□□□ -0.4
PTPN18-211ENST00000481492 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
PTPN18-211ENST00000481492 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
PTPN18-211ENST00000481492 HSBP1O75506 76 aa12.54□□□□□ -0.4
PTPN18-211ENST00000481492 SERF1AO75920 110 aa12.54□□□□□ -0.4
PTPN18-211ENST00000481492 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
PTPN18-211ENST00000481492 SCO1O75880 301 aa12.53□□□□□ -0.4
PTPN18-211ENST00000481492 KRTAP10-8P60410 259 aa12.53□□□□□ -0.4
PTPN18-211ENST00000481492 TMEM170BQ5T4T1 132 aa12.53□□□□□ -0.4
PTPN18-211ENST00000481492 UBE2BP63146 152 aa12.51□□□□□ -0.41
PTPN18-211ENST00000481492 ODF1Q14990 250 aa12.51□□□□□ -0.41
PTPN18-211ENST00000481492 REG3GQ6UW15 175 aa12.5□□□□□ -0.41
PTPN18-211ENST00000481492 TMEM223A0PJW6 202 aa12.49□□□□□ -0.41
PTPN18-211ENST00000481492 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
PTPN18-211ENST00000481492 PLA2G2DQ9UNK4 145 aa12.49□□□□□ -0.41
PTPN18-211ENST00000481492 PFN2P35080 140 aa12.48□□□□□ -0.41
PTPN18-211ENST00000481492 TP73-AS1Q9UF72 201 aa12.47□□□□□ -0.41
PTPN18-211ENST00000481492 MRPL55Q7Z7F7 128 aaKnown RBP12.46□□□□□ -0.41
PTPN18-211ENST00000481492 ERG28Q9UKR5 140 aa12.46□□□□□ -0.41
PTPN18-211ENST00000481492 LBHQ53QV2 105 aaPredicted RBP12.45□□□□□ -0.42
PTPN18-211ENST00000481492 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
PTPN18-211ENST00000481492 RNF213Q63HN8 5207 aa12.45□□□□□ -0.42
PTPN18-211ENST00000481492 IGLV5-37A0A075B6J1 123 aa12.44□□□□□ -0.42
PTPN18-211ENST00000481492 LEPROTL1O95214 131 aa12.44□□□□□ -0.42
PTPN18-211ENST00000481492 SND1-IT1Q9HBX3 110 aa12.44□□□□□ -0.42
PTPN18-211ENST00000481492 DIRC1Q969H9 104 aa12.43□□□□□ -0.42
PTPN18-211ENST00000481492 H0Y8G0 127 aa12.43□□□□□ -0.42
PTPN18-211ENST00000481492 H0Y9J4 135 aa12.43□□□□□ -0.42
PTPN18-211ENST00000481492 Q8NDZ9 215 aa12.43□□□□□ -0.42
PTPN18-211ENST00000481492 RPL37AP8A6NKH3 93 aa12.42□□□□□ -0.42
PTPN18-211ENST00000481492 FABP4P15090 132 aa12.42□□□□□ -0.42
PTPN18-211ENST00000481492 GAGE10A6NGK3 116 aa12.41□□□□□ -0.42
PTPN18-211ENST00000481492 COX17Q14061 63 aa12.41□□□□□ -0.42
PTPN18-211ENST00000481492 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
PTPN18-211ENST00000481492 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 VPREB1P12018 145 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
PTPN18-211ENST00000481492 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms