RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
RXRB-203ENST00000481441 PRR4Q16378 134 aa10.49□□□□□ -0.73
RXRB-203ENST00000481441 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
RXRB-203ENST00000481441 ERASQ7Z444 233 aa10.49□□□□□ -0.73
RXRB-203ENST00000481441 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
RXRB-203ENST00000481441 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
RXRB-203ENST00000481441 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 TIMM17AQ99595 171 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
RXRB-203ENST00000481441 TIMM21Q9BVV7 248 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 HSPB8Q9UJY1 196 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 PYGO1Q9Y3Y4 419 aa10.48□□□□□ -0.73
RXRB-203ENST00000481441 ATP5LO75964 103 aa10.47□□□□□ -0.73
RXRB-203ENST00000481441 PHF5AQ7RTV0 110 aaKnown RBP10.47□□□□□ -0.73
RXRB-203ENST00000481441 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
RXRB-203ENST00000481441 IGLV4-69A0A075B6H9 119 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.46□□□□□ -0.73
RXRB-203ENST00000481441 SMAGPQ0VAQ4 97 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 Q6ZUT4 128 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 TMEM141Q96I45 108 aa10.46□□□□□ -0.73
RXRB-203ENST00000481441 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
RXRB-203ENST00000481441 H0Y9J4 135 aa10.45□□□□□ -0.74
RXRB-203ENST00000481441 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
RXRB-203ENST00000481441 TMEM101Q96IK0 257 aa10.45□□□□□ -0.74
RXRB-203ENST00000481441 APOMO95445 188 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 KRTAP1-4P0C5Y4 121 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
RXRB-203ENST00000481441 SS18Q15532 418 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 Q6ZN92 141 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
RXRB-203ENST00000481441 NPSP0C0P6 89 aa10.43□□□□□ -0.74
RXRB-203ENST00000481441 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
RXRB-203ENST00000481441 MAP1LC3CQ9BXW4 147 aa10.43□□□□□ -0.74
RXRB-203ENST00000481441 H0Y8G0 127 aa10.42□□□□□ -0.74
RXRB-203ENST00000481441 C3orf79P0CE67 100 aa10.42□□□□□ -0.74
RXRB-203ENST00000481441 KRTDAPP60985 99 aa10.42□□□□□ -0.74
RXRB-203ENST00000481441 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
RXRB-203ENST00000481441 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
RXRB-203ENST00000481441 CAMK2N2Q96S95 79 aa10.41□□□□□ -0.74
RXRB-203ENST00000481441 AMELXQ99217 191 aa10.41□□□□□ -0.74
RXRB-203ENST00000481441 VCX2Q9H322 139 aa10.41□□□□□ -0.74
RXRB-203ENST00000481441 SYS1-DBNDD2H3BUS1 97 aa10.4□□□□□ -0.74
RXRB-203ENST00000481441 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
RXRB-203ENST00000481441 PMVKQ15126 192 aa10.4□□□□□ -0.74
RXRB-203ENST00000481441 TEX43Q6ZNM6 134 aa10.4□□□□□ -0.74
RXRB-203ENST00000481441 A0A087WZ39 114 aa10.39□□□□□ -0.75
RXRB-203ENST00000481441 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
RXRB-203ENST00000481441 MALP21145 153 aa10.39□□□□□ -0.75
RXRB-203ENST00000481441 C2orf48Q96LS8 159 aa10.39□□□□□ -0.75
RXRB-203ENST00000481441 CST9LQ9H4G1 147 aa10.39□□□□□ -0.75
RXRB-203ENST00000481441 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
RXRB-203ENST00000481441 COX7A2LO14548 114 aa10.37□□□□□ -0.75
RXRB-203ENST00000481441 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
RXRB-203ENST00000481441 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
RXRB-203ENST00000481441 RPL13AP40429 203 aaKnown RBP10.36□□□□□ -0.75
RXRB-203ENST00000481441 UBE2D1P51668 147 aa10.36□□□□□ -0.75
RXRB-203ENST00000481441 AKR1D1P51857 326 aa10.36□□□□□ -0.75
RXRB-203ENST00000481441 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
RXRB-203ENST00000481441 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
RXRB-203ENST00000481441 RNF151Q2KHN1 245 aa10.35□□□□□ -0.75
RXRB-203ENST00000481441 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
RXRB-203ENST00000481441 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
RXRB-203ENST00000481441 FAM168BA1KXE4 195 aa10.34□□□□□ -0.75
RXRB-203ENST00000481441 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
RXRB-203ENST00000481441 F8VRH5 84 aa10.33□□□□□ -0.76
RXRB-203ENST00000481441 C20orf202A1L168 122 aa10.33□□□□□ -0.76
RXRB-203ENST00000481441 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
RXRB-203ENST00000481441 C5orf38Q86SI9 138 aa10.33□□□□□ -0.76
RXRB-203ENST00000481441 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
RXRB-203ENST00000481441 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
RXRB-203ENST00000481441 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
RXRB-203ENST00000481441 JOSD1Q15040 202 aaPredicted RBP10.31□□□□□ -0.76
RXRB-203ENST00000481441 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
RXRB-203ENST00000481441 TINCRA0A1B0GVN0 87 aa10.3□□□□□ -0.76
RXRB-203ENST00000481441 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
RXRB-203ENST00000481441 DPM2O94777 84 aa10.3□□□□□ -0.76
RXRB-203ENST00000481441 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
RXRB-203ENST00000481441 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
RXRB-203ENST00000481441 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
RXRB-203ENST00000481441 TSPAN13O95857 204 aa10.29□□□□□ -0.76
RXRB-203ENST00000481441 IGKCP01834 107 aa10.29□□□□□ -0.76
RXRB-203ENST00000481441 PLNP26678 52 aa10.29□□□□□ -0.76
RXRB-203ENST00000481441 ATOH7Q8N100 152 aa10.29□□□□□ -0.76
RXRB-203ENST00000481441 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
RXRB-203ENST00000481441 TLX1NBP0CAT3 122 aa10.28□□□□□ -0.76
RXRB-203ENST00000481441 SEC11AP67812 179 aa10.28□□□□□ -0.76
RXRB-203ENST00000481441 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
RXRB-203ENST00000481441 HERVK_113P63121 156 aa10.27□□□□□ -0.77
RXRB-203ENST00000481441 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
RXRB-203ENST00000481441 F8WDY8 70 aa10.26□□□□□ -0.77
RXRB-203ENST00000481441 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
RXRB-203ENST00000481441 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
RXRB-203ENST00000481441 LINC00469Q8N7U9 141 aa10.26□□□□□ -0.77
RXRB-203ENST00000481441 CDKN2A-AS1Q9UH64 79 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms