RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LINC00173Q6ZV60 143 aa7.07□□□□□ -1.28
CCM2-213ENST00000480658 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
CCM2-213ENST00000480658 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 M0QXV9 152 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
CCM2-213ENST00000480658 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
CCM2-213ENST00000480658 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
CCM2-213ENST00000480658 TINCRA0A1B0GVN0 87 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 H3BRM9 83 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 NDUFA5Q16718 116 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 PDZD11Q5EBL8 140 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 C10orf91Q5T1B1 145 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
CCM2-213ENST00000480658 SLC7A5P1Q8MH63 180 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 LINC00469Q8N7U9 141 aa7.05□□□□□ -1.28
CCM2-213ENST00000480658 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
CCM2-213ENST00000480658 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
CCM2-213ENST00000480658 NUPR1O60356 82 aa7.04□□□□□ -1.28
CCM2-213ENST00000480658 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
CCM2-213ENST00000480658 C2orf82Q6UX34 121 aa7.04□□□□□ -1.28
CCM2-213ENST00000480658 CDKN2A-AS1Q9UH64 79 aa7.04□□□□□ -1.28
CCM2-213ENST00000480658 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
CCM2-213ENST00000480658 RAB5BP61020 215 aa7.03□□□□□ -1.28
CCM2-213ENST00000480658 PMVKQ15126 192 aa7.03□□□□□ -1.28
CCM2-213ENST00000480658 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
CCM2-213ENST00000480658 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
CCM2-213ENST00000480658 H0Y9J4 135 aa7.02□□□□□ -1.29
CCM2-213ENST00000480658 RPL13AP40429 203 aaKnown RBP7.02□□□□□ -1.29
CCM2-213ENST00000480658 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
CCM2-213ENST00000480658 FABP9Q0Z7S8 132 aa7.02□□□□□ -1.29
CCM2-213ENST00000480658 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
CCM2-213ENST00000480658 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
CCM2-213ENST00000480658 SVBPQ8N300 66 aa7.01□□□□□ -1.29
CCM2-213ENST00000480658 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
CCM2-213ENST00000480658 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
CCM2-213ENST00000480658 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
CCM2-213ENST00000480658 SMIM1B2RUZ4 78 aa7□□□□□ -1.29
CCM2-213ENST00000480658 ATP5LO75964 103 aa7□□□□□ -1.29
CCM2-213ENST00000480658 SNAPINO95295 136 aa7□□□□□ -1.29
CCM2-213ENST00000480658 APOC3P02656 99 aa7□□□□□ -1.29
CCM2-213ENST00000480658 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
CCM2-213ENST00000480658 HBDP02042 147 aa6.99□□□□□ -1.29
CCM2-213ENST00000480658 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
CCM2-213ENST00000480658 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
CCM2-213ENST00000480658 LINC00614P0C842 121 aa6.98□□□□□ -1.29
CCM2-213ENST00000480658 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
CCM2-213ENST00000480658 TRAPPC1Q9Y5R8 145 aa6.98□□□□□ -1.29
CCM2-213ENST00000480658 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
CCM2-213ENST00000480658 COX17Q14061 63 aa6.97□□□□□ -1.29
CCM2-213ENST00000480658 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
CCM2-213ENST00000480658 ZNF861PO60384 105 aa6.96□□□□□ -1.3
CCM2-213ENST00000480658 IGLC3P0DOY3 106 aa6.96□□□□□ -1.3
CCM2-213ENST00000480658 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
CCM2-213ENST00000480658 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
CCM2-213ENST00000480658 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
CCM2-213ENST00000480658 LCE2BO14633 110 aa6.94□□□□□ -1.3
CCM2-213ENST00000480658 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
CCM2-213ENST00000480658 NDUFA6P56556 154 aa6.94□□□□□ -1.3
CCM2-213ENST00000480658 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
CCM2-213ENST00000480658 TNXBP22105 4242 aa6.93□□□□□ -1.3
CCM2-213ENST00000480658 IGLV5-37A0A075B6J1 123 aa6.93□□□□□ -1.3
CCM2-213ENST00000480658 IGLV5-39A0A0G2JS06 123 aa6.93□□□□□ -1.3
CCM2-213ENST00000480658 BCE1O60756 84 aa6.93□□□□□ -1.3
CCM2-213ENST00000480658 RPL24P83731 157 aaKnown RBP6.93□□□□□ -1.3
CCM2-213ENST00000480658 CHCHD1Q96BP2 118 aaKnown RBP6.93□□□□□ -1.3
CCM2-213ENST00000480658 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
CCM2-213ENST00000480658 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 BAGE3Q86Y29 109 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
CCM2-213ENST00000480658 A0A096LNJ9 63 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 UBE2AP49459 152 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
CCM2-213ENST00000480658 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 YPEL4Q96NS1 127 aa6.89□□□□□ -1.31
CCM2-213ENST00000480658 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
CCM2-213ENST00000480658 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
CCM2-213ENST00000480658 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
CCM2-213ENST00000480658 CRYGAP11844 174 aa6.87□□□□□ -1.31
CCM2-213ENST00000480658 PFN2P35080 140 aa6.87□□□□□ -1.31
CCM2-213ENST00000480658 HSBP1O75506 76 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 SCO1O75880 301 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 HERV-K104P63124 156 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 CTAG1AP78358 180 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 IFI27L1Q96BM0 104 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
CCM2-213ENST00000480658 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
CCM2-213ENST00000480658 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
CCM2-213ENST00000480658 S100A12P80511 92 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms