RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 Q8IZM0 81 aa10.63□□□□□ -0.71
CDKN1A-207ENST00000478800 GAGE2DQ9UEU5 116 aa10.63□□□□□ -0.71
CDKN1A-207ENST00000478800 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
CDKN1A-207ENST00000478800 HBDP02042 147 aa10.62□□□□□ -0.71
CDKN1A-207ENST00000478800 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
CDKN1A-207ENST00000478800 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
CDKN1A-207ENST00000478800 Q6ZRP5 223 aa10.62□□□□□ -0.71
CDKN1A-207ENST00000478800 NDUFC2-KCTD14E9PQ53 114 aa10.6□□□□□ -0.71
CDKN1A-207ENST00000478800 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
CDKN1A-207ENST00000478800 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
CDKN1A-207ENST00000478800 SLC7A5P1Q8MH63 180 aa10.6□□□□□ -0.71
CDKN1A-207ENST00000478800 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
CDKN1A-207ENST00000478800 H3BRM9 83 aa10.59□□□□□ -0.71
CDKN1A-207ENST00000478800 ATP5LO75964 103 aa10.59□□□□□ -0.71
CDKN1A-207ENST00000478800 CXCL5P42830 114 aa10.59□□□□□ -0.71
CDKN1A-207ENST00000478800 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
CDKN1A-207ENST00000478800 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
CDKN1A-207ENST00000478800 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
CDKN1A-207ENST00000478800 F8VRH5 84 aa10.58□□□□□ -0.72
CDKN1A-207ENST00000478800 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
CDKN1A-207ENST00000478800 A0A096LNJ9 63 aa10.57□□□□□ -0.72
CDKN1A-207ENST00000478800 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
CDKN1A-207ENST00000478800 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
CDKN1A-207ENST00000478800 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
CDKN1A-207ENST00000478800 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
CDKN1A-207ENST00000478800 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
CDKN1A-207ENST00000478800 FAM168BA1KXE4 195 aa10.54□□□□□ -0.72
CDKN1A-207ENST00000478800 IGLC3P0DOY3 106 aa10.54□□□□□ -0.72
CDKN1A-207ENST00000478800 BAGE3Q86Y29 109 aa10.54□□□□□ -0.72
CDKN1A-207ENST00000478800 HSBP1O75506 76 aa10.52□□□□□ -0.73
CDKN1A-207ENST00000478800 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
CDKN1A-207ENST00000478800 M0QXV9 152 aa10.51□□□□□ -0.73
CDKN1A-207ENST00000478800 TRGC2P03986 189 aa10.51□□□□□ -0.73
CDKN1A-207ENST00000478800 UBE2BP63146 152 aa10.51□□□□□ -0.73
CDKN1A-207ENST00000478800 PSORS1C2Q9UIG4 136 aa10.51□□□□□ -0.73
CDKN1A-207ENST00000478800 ZNF22P17026 224 aaPredicted RBP10.5□□□□□ -0.73
CDKN1A-207ENST00000478800 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
CDKN1A-207ENST00000478800 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
CDKN1A-207ENST00000478800 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
CDKN1A-207ENST00000478800 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
CDKN1A-207ENST00000478800 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
CDKN1A-207ENST00000478800 XAGE1AQ9HD64 81 aa10.49□□□□□ -0.73
CDKN1A-207ENST00000478800 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
CDKN1A-207ENST00000478800 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
CDKN1A-207ENST00000478800 TRAV12-1A0A0B4J245 112 aa10.46□□□□□ -0.73
CDKN1A-207ENST00000478800 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.73
CDKN1A-207ENST00000478800 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
CDKN1A-207ENST00000478800 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDKN1A-207ENST00000478800 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
CDKN1A-207ENST00000478800 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
CDKN1A-207ENST00000478800 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
CDKN1A-207ENST00000478800 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
CDKN1A-207ENST00000478800 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
CDKN1A-207ENST00000478800 COLCA2A8K830 154 aa10.43□□□□□ -0.74
CDKN1A-207ENST00000478800 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
CDKN1A-207ENST00000478800 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
CDKN1A-207ENST00000478800 H0Y8G0 127 aa10.42□□□□□ -0.74
CDKN1A-207ENST00000478800 SERF1AO75920 110 aa10.42□□□□□ -0.74
CDKN1A-207ENST00000478800 LEPROTL1O95214 131 aa10.42□□□□□ -0.74
CDKN1A-207ENST00000478800 PFN2P35080 140 aa10.42□□□□□ -0.74
CDKN1A-207ENST00000478800 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
CDKN1A-207ENST00000478800 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
CDKN1A-207ENST00000478800 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
CDKN1A-207ENST00000478800 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 MT1HL1P0DM35 61 aa10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 DIRC1Q969H9 104 aa10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 ERG28Q9UKR5 140 aa10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 HMCN2Q8NDA2 5059 aa10.4□□□□□ -0.74
CDKN1A-207ENST00000478800 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
CDKN1A-207ENST00000478800 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
CDKN1A-207ENST00000478800 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
CDKN1A-207ENST00000478800 COX17Q14061 63 aa10.38□□□□□ -0.75
CDKN1A-207ENST00000478800 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
CDKN1A-207ENST00000478800 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
CDKN1A-207ENST00000478800 FABP4P15090 132 aa10.37□□□□□ -0.75
CDKN1A-207ENST00000478800 ODF1Q14990 250 aa10.37□□□□□ -0.75
CDKN1A-207ENST00000478800 NUPR1O60356 82 aa10.36□□□□□ -0.75
CDKN1A-207ENST00000478800 SCO1O75880 301 aa10.35□□□□□ -0.75
CDKN1A-207ENST00000478800 LINC00310P59036 64 aa10.35□□□□□ -0.75
CDKN1A-207ENST00000478800 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 ATP6V1G1O75348 118 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 PLNP26678 52 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 LINC00158P58513 81 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 LINC00167Q96N53 147 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 SND1-IT1Q9HBX3 110 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
CDKN1A-207ENST00000478800 IGLV5-37A0A075B6J1 123 aa10.33□□□□□ -0.76
CDKN1A-207ENST00000478800 H0Y9J4 135 aa10.33□□□□□ -0.76
CDKN1A-207ENST00000478800 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
CDKN1A-207ENST00000478800 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
CDKN1A-207ENST00000478800 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
CDKN1A-207ENST00000478800 HERV-K104P63124 156 aa10.31□□□□□ -0.76
CDKN1A-207ENST00000478800 MEIG1Q5JSS6 88 aa10.31□□□□□ -0.76
CDKN1A-207ENST00000478800 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
CDKN1A-207ENST00000478800 ZNF861PO60384 105 aa10.3□□□□□ -0.76
CDKN1A-207ENST00000478800 DPM2O94777 84 aa10.3□□□□□ -0.76
CDKN1A-207ENST00000478800 HERVK_113P61574 105 aa10.3□□□□□ -0.76
CDKN1A-207ENST00000478800 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms