RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 CDKN2A-AS1Q9UH64 79 aa8.53□□□□□ -1.04
HDAC7-222ENST00000477937 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
HDAC7-222ENST00000477937 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
HDAC7-222ENST00000477937 NDUFC2-KCTD14E9PQ53 114 aa8.52□□□□□ -1.05
HDAC7-222ENST00000477937 FA2HQ7L5A8 372 aa8.52□□□□□ -1.05
HDAC7-222ENST00000477937 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
HDAC7-222ENST00000477937 PLA2G2DQ9UNK4 145 aa8.52□□□□□ -1.05
HDAC7-222ENST00000477937 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
HDAC7-222ENST00000477937 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
HDAC7-222ENST00000477937 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
HDAC7-222ENST00000477937 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
HDAC7-222ENST00000477937 APOC3P02656 99 aa8.48□□□□□ -1.05
HDAC7-222ENST00000477937 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
HDAC7-222ENST00000477937 TRAPPC1Q9Y5R8 145 aa8.48□□□□□ -1.05
HDAC7-222ENST00000477937 F8VRH5 84 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 M0QXV9 152 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 CXCL5P42830 114 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 PMVKQ15126 192 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 PDZD11Q5EBL8 140 aa8.47□□□□□ -1.05
HDAC7-222ENST00000477937 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
HDAC7-222ENST00000477937 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 SNAPINO95295 136 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 UBE2BP63146 152 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 SVBPQ8N300 66 aa8.46□□□□□ -1.06
HDAC7-222ENST00000477937 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
HDAC7-222ENST00000477937 LINC00614P0C842 121 aa8.45□□□□□ -1.06
HDAC7-222ENST00000477937 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
HDAC7-222ENST00000477937 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
HDAC7-222ENST00000477937 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
HDAC7-222ENST00000477937 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
HDAC7-222ENST00000477937 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
HDAC7-222ENST00000477937 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
HDAC7-222ENST00000477937 H3BRM9 83 aa8.42□□□□□ -1.06
HDAC7-222ENST00000477937 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
HDAC7-222ENST00000477937 NDUFA6P56556 154 aa8.42□□□□□ -1.06
HDAC7-222ENST00000477937 RAB5BP61020 215 aa8.42□□□□□ -1.06
HDAC7-222ENST00000477937 URB1-AS1Q96HZ7 61 aa8.42□□□□□ -1.06
HDAC7-222ENST00000477937 A0A096LNJ9 63 aa8.41□□□□□ -1.06
HDAC7-222ENST00000477937 HBDP02042 147 aa8.41□□□□□ -1.06
HDAC7-222ENST00000477937 C22orf24Q9Y442 160 aa8.41□□□□□ -1.06
HDAC7-222ENST00000477937 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
HDAC7-222ENST00000477937 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
HDAC7-222ENST00000477937 ATP5LO75964 103 aa8.39□□□□□ -1.07
HDAC7-222ENST00000477937 ODF1Q14990 250 aa8.39□□□□□ -1.07
HDAC7-222ENST00000477937 PMCHL1Q16048 86 aa8.39□□□□□ -1.07
HDAC7-222ENST00000477937 H0Y9J4 135 aa8.38□□□□□ -1.07
HDAC7-222ENST00000477937 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
HDAC7-222ENST00000477937 TNXBP22105 4242 aa8.37□□□□□ -1.07
HDAC7-222ENST00000477937 NUPR1O60356 82 aa8.36□□□□□ -1.07
HDAC7-222ENST00000477937 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
HDAC7-222ENST00000477937 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
HDAC7-222ENST00000477937 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
HDAC7-222ENST00000477937 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
HDAC7-222ENST00000477937 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
HDAC7-222ENST00000477937 ZNF861PO60384 105 aa8.34□□□□□ -1.07
HDAC7-222ENST00000477937 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
HDAC7-222ENST00000477937 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
HDAC7-222ENST00000477937 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
HDAC7-222ENST00000477937 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
HDAC7-222ENST00000477937 PFN2P35080 140 aa8.33□□□□□ -1.08
HDAC7-222ENST00000477937 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
HDAC7-222ENST00000477937 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
HDAC7-222ENST00000477937 NKAPP1Q8N9T2 125 aa8.32□□□□□ -1.08
HDAC7-222ENST00000477937 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
HDAC7-222ENST00000477937 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
HDAC7-222ENST00000477937 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 RPL37AP8A6NKH3 93 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 COX17Q14061 63 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
HDAC7-222ENST00000477937 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
HDAC7-222ENST00000477937 BCE1O60756 84 aa8.3□□□□□ -1.08
HDAC7-222ENST00000477937 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
HDAC7-222ENST00000477937 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
HDAC7-222ENST00000477937 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
HDAC7-222ENST00000477937 RPL28P46779 137 aaKnown RBP8.29□□□□□ -1.08
HDAC7-222ENST00000477937 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
HDAC7-222ENST00000477937 HSBP1O75506 76 aa8.28□□□□□ -1.08
HDAC7-222ENST00000477937 RPL13AP40429 203 aaKnown RBP8.28□□□□□ -1.08
HDAC7-222ENST00000477937 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
HDAC7-222ENST00000477937 TRGC2P03986 189 aa8.27□□□□□ -1.09
HDAC7-222ENST00000477937 FAM19A2Q8N3H0 131 aa8.27□□□□□ -1.09
HDAC7-222ENST00000477937 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
HDAC7-222ENST00000477937 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
HDAC7-222ENST00000477937 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
HDAC7-222ENST00000477937 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
HDAC7-222ENST00000477937 SLC7A5P1Q8MH63 180 aa8.25□□□□□ -1.09
HDAC7-222ENST00000477937 SCO1O75880 301 aa8.24□□□□□ -1.09
HDAC7-222ENST00000477937 VPREB1P12018 145 aa8.24□□□□□ -1.09
HDAC7-222ENST00000477937 UBE2AP49459 152 aa8.24□□□□□ -1.09
HDAC7-222ENST00000477937 LINC00158P58513 81 aa8.24□□□□□ -1.09
HDAC7-222ENST00000477937 H0Y8G0 127 aa8.22□□□□□ -1.09
HDAC7-222ENST00000477937 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
HDAC7-222ENST00000477937 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
HDAC7-222ENST00000477937 ATP6V1G1O75348 118 aa8.21□□□□□ -1.1
HDAC7-222ENST00000477937 SERF1AO75920 110 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms