RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PRSS2P07478 247 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 NDUFA6P56556 154 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
ATG9A-220ENST00000475339 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 LINC00469Q8N7U9 141 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 CST9LQ9H4G1 147 aa8.74□□□□□ -1.01
ATG9A-220ENST00000475339 A0A096LNI7 61 aa8.73□□□□□ -1.01
ATG9A-220ENST00000475339 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
ATG9A-220ENST00000475339 TRGC2P03986 189 aa8.73□□□□□ -1.01
ATG9A-220ENST00000475339 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
ATG9A-220ENST00000475339 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
ATG9A-220ENST00000475339 CHCHD1Q96BP2 118 aaKnown RBP8.73□□□□□ -1.01
ATG9A-220ENST00000475339 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
ATG9A-220ENST00000475339 A0A096LNJ9 63 aa8.72□□□□□ -1.01
ATG9A-220ENST00000475339 TINCRA0A1B0GVN0 87 aa8.72□□□□□ -1.01
ATG9A-220ENST00000475339 ATP5LO75964 103 aa8.72□□□□□ -1.01
ATG9A-220ENST00000475339 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
ATG9A-220ENST00000475339 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
ATG9A-220ENST00000475339 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.02
ATG9A-220ENST00000475339 STPG4Q8N801 248 aa8.71□□□□□ -1.02
ATG9A-220ENST00000475339 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
ATG9A-220ENST00000475339 HSBP1O75506 76 aa8.7□□□□□ -1.02
ATG9A-220ENST00000475339 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
ATG9A-220ENST00000475339 CKS1BP61024 79 aa8.7□□□□□ -1.02
ATG9A-220ENST00000475339 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
ATG9A-220ENST00000475339 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
ATG9A-220ENST00000475339 COLCA2A8K830 154 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 H3BRM9 83 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 KIAA0087Q14695 138 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 PDZD11Q5EBL8 140 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 UNQ6190/PRO20217Q6UXQ8 127 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
ATG9A-220ENST00000475339 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
ATG9A-220ENST00000475339 SCO1O75880 301 aa8.68□□□□□ -1.02
ATG9A-220ENST00000475339 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
ATG9A-220ENST00000475339 Q8IZM0 81 aa8.68□□□□□ -1.02
ATG9A-220ENST00000475339 C6orf48Q9UBA6 75 aa8.68□□□□□ -1.02
ATG9A-220ENST00000475339 IGLV5-45A0A087WSX0 123 aa8.67□□□□□ -1.02
ATG9A-220ENST00000475339 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
ATG9A-220ENST00000475339 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
ATG9A-220ENST00000475339 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
ATG9A-220ENST00000475339 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
ATG9A-220ENST00000475339 SERF1AO75920 110 aa8.65□□□□□ -1.02
ATG9A-220ENST00000475339 CXCL5P42830 114 aa8.65□□□□□ -1.02
ATG9A-220ENST00000475339 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATG9A-220ENST00000475339 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
ATG9A-220ENST00000475339 IFI27L1Q96BM0 104 aa8.65□□□□□ -1.02
ATG9A-220ENST00000475339 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
ATG9A-220ENST00000475339 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
ATG9A-220ENST00000475339 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
ATG9A-220ENST00000475339 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
ATG9A-220ENST00000475339 F8VRH5 84 aa8.63□□□□□ -1.03
ATG9A-220ENST00000475339 ZNF22P17026 224 aaPredicted RBP8.63□□□□□ -1.03
ATG9A-220ENST00000475339 PRR4Q16378 134 aa8.63□□□□□ -1.03
ATG9A-220ENST00000475339 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
ATG9A-220ENST00000475339 NDUFC2-KCTD14E9PQ53 114 aa8.62□□□□□ -1.03
ATG9A-220ENST00000475339 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
ATG9A-220ENST00000475339 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
ATG9A-220ENST00000475339 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
ATG9A-220ENST00000475339 Q6ZRP5 223 aa8.62□□□□□ -1.03
ATG9A-220ENST00000475339 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
ATG9A-220ENST00000475339 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
ATG9A-220ENST00000475339 H0Y8G0 127 aa8.61□□□□□ -1.03
ATG9A-220ENST00000475339 HSPB8Q9UJY1 196 aa8.61□□□□□ -1.03
ATG9A-220ENST00000475339 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
ATG9A-220ENST00000475339 LINC00310P59036 64 aa8.59□□□□□ -1.03
ATG9A-220ENST00000475339 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
ATG9A-220ENST00000475339 IGLV5-39A0A0G2JS06 123 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 FABP4P15090 132 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
ATG9A-220ENST00000475339 FAM168BA1KXE4 195 aa8.56□□□□□ -1.04
ATG9A-220ENST00000475339 NUPR1O60356 82 aa8.56□□□□□ -1.04
ATG9A-220ENST00000475339 S100A1P23297 94 aa8.56□□□□□ -1.04
ATG9A-220ENST00000475339 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
ATG9A-220ENST00000475339 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
ATG9A-220ENST00000475339 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
ATG9A-220ENST00000475339 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
ATG9A-220ENST00000475339 M0QXV9 152 aa8.54□□□□□ -1.04
ATG9A-220ENST00000475339 C9orf129Q5T035 196 aaKnown RBP8.54□□□□□ -1.04
ATG9A-220ENST00000475339 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
ATG9A-220ENST00000475339 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
ATG9A-220ENST00000475339 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
ATG9A-220ENST00000475339 ATP6V1G1O75348 118 aa8.53□□□□□ -1.04
ATG9A-220ENST00000475339 PLNP26678 52 aa8.53□□□□□ -1.04
ATG9A-220ENST00000475339 PFN2P35080 140 aa8.52□□□□□ -1.05
ATG9A-220ENST00000475339 UBE2BP63146 152 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms