RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	TRBV30	A0A0K0K1B3	111 aa		9.25	□□□□□ -0.93
SSR4-208	ENST00000471880	LINC00614	P0C842	121 aa		9.25	□□□□□ -0.93
SSR4-208	ENST00000471880	PMVK	Q15126	192 aa		9.25	□□□□□ -0.93
SSR4-208	ENST00000471880		Q6ZRP5	223 aa		9.25	□□□□□ -0.93
SSR4-208	ENST00000471880	LINC01546	A6NGU7	62 aa		9.24	□□□□□ -0.93
SSR4-208	ENST00000471880	PHF5A	Q7RTV0	110 aa	Known RBP	9.24	□□□□□ -0.93
SSR4-208	ENST00000471880	FAM19A3	Q7Z5A8	133 aa		9.24	□□□□□ -0.93
SSR4-208	ENST00000471880	CST9L	Q9H4G1	147 aa		9.24	□□□□□ -0.93
SSR4-208	ENST00000471880	TINCR	A0A1B0GVN0	87 aa		9.23	□□□□□ -0.93
SSR4-208	ENST00000471880	FAM168B	A1KXE4	195 aa		9.23	□□□□□ -0.93
SSR4-208	ENST00000471880	RAB5B	P61020	215 aa		9.23	□□□□□ -0.93
SSR4-208	ENST00000471880		Q8IZM0	81 aa		9.23	□□□□□ -0.93
SSR4-208	ENST00000471880	HBD	P02042	147 aa		9.22	□□□□□ -0.93
SSR4-208	ENST00000471880	SPINK8	P0C7L1	97 aa		9.22	□□□□□ -0.93
SSR4-208	ENST00000471880	TLX1NB	P0CAT3	122 aa		9.22	□□□□□ -0.93
SSR4-208	ENST00000471880	CBLN2	Q8IUK8	224 aa		9.22	□□□□□ -0.93
SSR4-208	ENST00000471880	NDUFC2-KCTD14	E9PQ53	114 aa		9.21	□□□□□ -0.94
SSR4-208	ENST00000471880	SLC7A5P1	Q8MH63	180 aa		9.21	□□□□□ -0.94
SSR4-208	ENST00000471880	SMIM1	B2RUZ4	78 aa		9.2	□□□□□ -0.94
SSR4-208	ENST00000471880		H3BRM9	83 aa		9.2	□□□□□ -0.94
SSR4-208	ENST00000471880	COX7B2	Q8TF08	81 aa		9.2	□□□□□ -0.94
SSR4-208	ENST00000471880	URB1-AS1	Q96HZ7	61 aa		9.2	□□□□□ -0.94
SSR4-208	ENST00000471880		F8VRH5	84 aa		9.19	□□□□□ -0.94
SSR4-208	ENST00000471880	UBE2B	P63146	152 aa		9.19	□□□□□ -0.94
SSR4-208	ENST00000471880	C1orf137	Q5JT78	98 aa		9.19	□□□□□ -0.94
SSR4-208	ENST00000471880		A0A096LNJ9	63 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880		M0QXV9	152 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	ATP5L	O75964	103 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	CXCL5	P42830	114 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	PDZD11	Q5EBL8	140 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	XAGE1A	Q9HD64	81 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	PSORS1C2	Q9UIG4	136 aa		9.18	□□□□□ -0.94
SSR4-208	ENST00000471880	BAGE3	Q86Y29	109 aa		9.17	□□□□□ -0.94
SSR4-208	ENST00000471880	C9orf129	Q5T035	196 aa	Known RBP	9.16	□□□□□ -0.94
SSR4-208	ENST00000471880	YPEL4	Q96NS1	127 aa		9.16	□□□□□ -0.94
SSR4-208	ENST00000471880	IGLV5-45	A0A087WSX0	123 aa		9.15	□□□□□ -0.94
SSR4-208	ENST00000471880	TMEM170B	Q5T4T1	132 aa		9.15	□□□□□ -0.94
SSR4-208	ENST00000471880	REG3G	Q6UW15	175 aa		9.15	□□□□□ -0.94
SSR4-208	ENST00000471880	SPINK6	Q6UWN8	80 aa		9.15	□□□□□ -0.94
SSR4-208	ENST00000471880	HSBP1	O75506	76 aa		9.14	□□□□□ -0.95
SSR4-208	ENST00000471880	IGLC3	P0DOY3	106 aa		9.14	□□□□□ -0.95
SSR4-208	ENST00000471880	TRGC2	P03986	189 aa		9.13	□□□□□ -0.95
SSR4-208	ENST00000471880	ZNF22	P17026	224 aa	Predicted RBP	9.13	□□□□□ -0.95
SSR4-208	ENST00000471880	CHCHD1	Q96BP2	118 aa	Known RBP	9.13	□□□□□ -0.95
SSR4-208	ENST00000471880	CHTOP	Q9Y3Y2	248 aa	Known RBP	9.13	□□□□□ -0.95
SSR4-208	ENST00000471880		H0Y8G0	127 aa		9.12	□□□□□ -0.95
SSR4-208	ENST00000471880	MT1HL1	P0DM35	61 aa		9.12	□□□□□ -0.95
SSR4-208	ENST00000471880	SERTAD4-AS1	Q5TG53	156 aa		9.12	□□□□□ -0.95
SSR4-208	ENST00000471880	C11orf86	A6NJI1	115 aa		9.11	□□□□□ -0.95
SSR4-208	ENST00000471880	PFN2	P35080	140 aa		9.11	□□□□□ -0.95
SSR4-208	ENST00000471880	FAM19A2	Q8N3H0	131 aa		9.11	□□□□□ -0.95
SSR4-208	ENST00000471880	IFI27L1	Q96BM0	104 aa		9.11	□□□□□ -0.95
SSR4-208	ENST00000471880	KRTAP11-1	Q8IUC1	163 aa		9.1	□□□□□ -0.95
SSR4-208	ENST00000471880	KRTAP7-1	Q8IUC3	87 aa		9.1	□□□□□ -0.95
SSR4-208	ENST00000471880	IGLV7-43	P04211	117 aa		9.09	□□□□□ -0.95
SSR4-208	ENST00000471880	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.09	□□□□□ -0.95
SSR4-208	ENST00000471880	ZNF625	Q96I27	306 aa	Predicted RBP	9.09	□□□□□ -0.95
SSR4-208	ENST00000471880	C22orf24	Q9Y442	160 aa		9.09	□□□□□ -0.95
SSR4-208	ENST00000471880	LBH	Q53QV2	105 aa	Predicted RBP	9.08	□□□□□ -0.96
SSR4-208	ENST00000471880	HMCN2	Q8NDA2	5059 aa		9.07	□□□□□ -0.96
SSR4-208	ENST00000471880	IGLV5-39	A0A0G2JS06	123 aa		9.07	□□□□□ -0.96
SSR4-208	ENST00000471880	GAGE10	A6NGK3	116 aa		9.07	□□□□□ -0.96
SSR4-208	ENST00000471880	LINC01600	Q96MT4	127 aa		9.07	□□□□□ -0.96
SSR4-208	ENST00000471880	SERF1A	O75920	110 aa		9.06	□□□□□ -0.96
SSR4-208	ENST00000471880	MRPL55	Q7Z7F7	128 aa	Known RBP	9.06	□□□□□ -0.96
SSR4-208	ENST00000471880	NKAPP1	Q8N9T2	125 aa		9.06	□□□□□ -0.96
SSR4-208	ENST00000471880	DIRC1	Q969H9	104 aa		9.06	□□□□□ -0.96
SSR4-208	ENST00000471880	PLA2G2D	Q9UNK4	145 aa		9.06	□□□□□ -0.96
SSR4-208	ENST00000471880	ERG28	Q9UKR5	140 aa		9.05	□□□□□ -0.96
SSR4-208	ENST00000471880	TRAV12-1	A0A0B4J245	112 aa		9.04	□□□□□ -0.96
SSR4-208	ENST00000471880	RPL37AP8	A6NKH3	93 aa		9.04	□□□□□ -0.96
SSR4-208	ENST00000471880	LEPROTL1	O95214	131 aa		9.04	□□□□□ -0.96
SSR4-208	ENST00000471880	FABP4	P15090	132 aa		9.04	□□□□□ -0.96
SSR4-208	ENST00000471880		A0A0U1RRA0	63 aa		9.03	□□□□□ -0.96
SSR4-208	ENST00000471880	ODF1	Q14990	250 aa		9.03	□□□□□ -0.96
SSR4-208	ENST00000471880	COLCA2	A8K830	154 aa		9.02	□□□□□ -0.97
SSR4-208	ENST00000471880	SCO1	O75880	301 aa		9.02	□□□□□ -0.97
SSR4-208	ENST00000471880	LINC00158	P58513	81 aa		9.02	□□□□□ -0.97
SSR4-208	ENST00000471880	TNXB	P22105	4242 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	TMEM223	A0PJW6	202 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880		H0Y9J4	135 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	ATP6V1G1	O75348	118 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	SFTA2	Q6UW10	78 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	LINC00167	Q96N53	147 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	TP73-AS1	Q9UF72	201 aa		9.01	□□□□□ -0.97
SSR4-208	ENST00000471880	NUPR1	O60356	82 aa		9	□□□□□ -0.97
SSR4-208	ENST00000471880	MEIG1	Q5JSS6	88 aa		9	□□□□□ -0.97
SSR4-208	ENST00000471880	SND1-IT1	Q9HBX3	110 aa		9	□□□□□ -0.97
SSR4-208	ENST00000471880	HSPB8	Q9UJY1	196 aa		9	□□□□□ -0.97
SSR4-208	ENST00000471880	LINC00310	P59036	64 aa		8.99	□□□□□ -0.97
SSR4-208	ENST00000471880	COX17	Q14061	63 aa		8.99	□□□□□ -0.97
SSR4-208	ENST00000471880	IGKV2-28	A0A075B6P5	120 aa		8.98	□□□□□ -0.97
SSR4-208	ENST00000471880	IGKV2D-28	P01615	120 aa		8.98	□□□□□ -0.97
SSR4-208	ENST00000471880	PMCHL2	Q9BQD1	86 aa		8.98	□□□□□ -0.97
SSR4-208	ENST00000471880	RPL24	P83731	157 aa	Known RBP	8.97	□□□□□ -0.97
SSR4-208	ENST00000471880	PRR26	Q8N8Z3	221 aa		8.97	□□□□□ -0.97
SSR4-208	ENST00000471880	ZNF861P	O60384	105 aa		8.96	□□□□□ -0.98
SSR4-208	ENST00000471880	BCE1	O60756	84 aa		8.96	□□□□□ -0.98
SSR4-208	ENST00000471880	RPL28	P46779	137 aa	Known RBP	8.96	□□□□□ -0.98
SSR4-208	ENST00000471880	UBE2A	P49459	152 aa		8.96	□□□□□ -0.98

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