RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 TLX1NBP0CAT3 122 aa6.11□□□□□ -1.43
SRRT-208ENST00000469602 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
SRRT-208ENST00000469602 TOMM7Q9P0U1 55 aa6.11□□□□□ -1.43
SRRT-208ENST00000469602 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
SRRT-208ENST00000469602 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
SRRT-208ENST00000469602 ATP5LO75964 103 aa6.1□□□□□ -1.43
SRRT-208ENST00000469602 CKS1BP61024 79 aa6.1□□□□□ -1.43
SRRT-208ENST00000469602 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
SRRT-208ENST00000469602 Q6ZRP5 223 aa6.1□□□□□ -1.43
SRRT-208ENST00000469602 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
SRRT-208ENST00000469602 A0A1W2PNN7 141 aa6.09□□□□□ -1.43
SRRT-208ENST00000469602 TRGC2P03986 189 aa6.09□□□□□ -1.43
SRRT-208ENST00000469602 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
SRRT-208ENST00000469602 NDUFA6P56556 154 aa6.09□□□□□ -1.43
SRRT-208ENST00000469602 C9orf116Q5BN46 136 aaPredicted RBP6.09□□□□□ -1.43
SRRT-208ENST00000469602 COLCA2A8K830 154 aa6.08□□□□□ -1.44
SRRT-208ENST00000469602 NDUFC2-KCTD14E9PQ53 114 aa6.08□□□□□ -1.44
SRRT-208ENST00000469602 HNRNPA3P51991 378 aaKnown RBP6.08□□□□□ -1.44
SRRT-208ENST00000469602 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
SRRT-208ENST00000469602 BAGE3Q86Y29 109 aa6.08□□□□□ -1.44
SRRT-208ENST00000469602 FAT3Q8TDW7 4589 aa6.08□□□□□ -1.44
SRRT-208ENST00000469602 F8VRH5 84 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 H3BRM9 83 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 SPINK8P0C7L1 97 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 CXCL5P42830 114 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
SRRT-208ENST00000469602 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
SRRT-208ENST00000469602 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
SRRT-208ENST00000469602 J3QL48 77 aa6.05□□□□□ -1.44
SRRT-208ENST00000469602 HSBP1O75506 76 aa6.05□□□□□ -1.44
SRRT-208ENST00000469602 ZNF22P17026 224 aaPredicted RBP6.05□□□□□ -1.44
SRRT-208ENST00000469602 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
SRRT-208ENST00000469602 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 IGLV5-39A0A0G2JS06 123 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 SERF1AO75920 110 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 LINC00310P59036 64 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
SRRT-208ENST00000469602 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
SRRT-208ENST00000469602 FAM19A5Q7Z5A7 132 aaPredicted RBP6.04□□□□□ -1.44
SRRT-208ENST00000469602 FAM19A2Q8N3H0 131 aa6.04□□□□□ -1.44
SRRT-208ENST00000469602 CHTOPQ9Y3Y2 248 aaKnown RBP6.04□□□□□ -1.44
SRRT-208ENST00000469602 SCO1O75880 301 aa6.03□□□□□ -1.44
SRRT-208ENST00000469602 OXTP01178 125 aa6.03□□□□□ -1.44
SRRT-208ENST00000469602 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
SRRT-208ENST00000469602 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
SRRT-208ENST00000469602 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
SRRT-208ENST00000469602 M0QXV9 152 aa6.01□□□□□ -1.45
SRRT-208ENST00000469602 NUPR1O60356 82 aa6.01□□□□□ -1.45
SRRT-208ENST00000469602 LEPROTL1O95214 131 aa6.01□□□□□ -1.45
SRRT-208ENST00000469602 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
SRRT-208ENST00000469602 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
SRRT-208ENST00000469602 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
SRRT-208ENST00000469602 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 H0Y8G0 127 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
SRRT-208ENST00000469602 ODF1Q14990 250 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 C1orf137Q5JT78 98 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 HSPB8Q9UJY1 196 aa5.99□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 FABP4P15090 132 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BBP33778 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BDP58876 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BCP62807 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 UBE2BP63146 152 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST2H2BEQ16778 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BHQ93079 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BNQ99877 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 HIST1H2BMQ99879 126 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
SRRT-208ENST00000469602 PLNP26678 52 aa5.97□□□□□ -1.45
SRRT-208ENST00000469602 PFN2P35080 140 aa5.97□□□□□ -1.45
SRRT-208ENST00000469602 COX17Q14061 63 aa5.97□□□□□ -1.45
SRRT-208ENST00000469602 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
SRRT-208ENST00000469602 ZNF625Q96I27 306 aaPredicted RBP5.97□□□□□ -1.45
SRRT-208ENST00000469602 PLA2G2DQ9UNK4 145 aa5.97□□□□□ -1.45
SRRT-208ENST00000469602 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
SRRT-208ENST00000469602 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
SRRT-208ENST00000469602 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
SRRT-208ENST00000469602 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
SRRT-208ENST00000469602 TP73-AS1Q9UF72 201 aa5.96□□□□□ -1.46
SRRT-208ENST00000469602 TNXBP22105 4242 aa5.96□□□□□ -1.46
SRRT-208ENST00000469602 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
SRRT-208ENST00000469602 MAP1LC3CQ9BXW4 147 aa5.95□□□□□ -1.46
SRRT-208ENST00000469602 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
SRRT-208ENST00000469602 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
SRRT-208ENST00000469602 DPM2O94777 84 aa5.94□□□□□ -1.46
SRRT-208ENST00000469602 LINC01600Q96MT4 127 aa5.94□□□□□ -1.46
SRRT-208ENST00000469602 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
SRRT-208ENST00000469602 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
SRRT-208ENST00000469602 DIRC1Q969H9 104 aa5.93□□□□□ -1.46
SRRT-208ENST00000469602 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
SRRT-208ENST00000469602 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms