RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C4orf3Q8WVX3 66 aa8.91□□□□□ -0.98
USP11-206ENST00000469080 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
USP11-206ENST00000469080 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
USP11-206ENST00000469080 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
USP11-206ENST00000469080 LEPROTO15243 131 aa8.9□□□□□ -0.98
USP11-206ENST00000469080 INAFM2P0DMQ5 153 aa8.9□□□□□ -0.99
USP11-206ENST00000469080 UBE2L6O14933 153 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 HILS1P60008 231 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 ADAMTSL4-AS1Q5T5F5 129 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 TSHBP01222 138 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
USP11-206ENST00000469080 WFDC9Q8NEX5 89 aa8.89□□□□□ -0.99
USP11-206ENST00000469080 M0QY20 66 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 TIMM17BO60830 172 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 PPP1R17O96001 155 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 PMAIP1Q13794 54 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 Q9HAA7 133 aa8.88□□□□□ -0.99
USP11-206ENST00000469080 XCL1P47992 114 aa8.87□□□□□ -0.99
USP11-206ENST00000469080 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
USP11-206ENST00000469080 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
USP11-206ENST00000469080 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
USP11-206ENST00000469080 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
USP11-206ENST00000469080 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
USP11-206ENST00000469080 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
USP11-206ENST00000469080 C16orf95Q9H693 158 aa8.86□□□□□ -0.99
USP11-206ENST00000469080 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
USP11-206ENST00000469080 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
USP11-206ENST00000469080 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
USP11-206ENST00000469080 LINC00467Q9BRT7 94 aa8.85□□□□□ -0.99
USP11-206ENST00000469080 LINC00315P59091 139 aa8.84□□□□□ -0.99
USP11-206ENST00000469080 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
USP11-206ENST00000469080 PRB2P02812 416 aaPredicted RBP8.84□□□□□ -0.99
USP11-206ENST00000469080 RPL36AP83881 106 aaKnown RBP8.84□□□□□ -0.99
USP11-206ENST00000469080 RPL36ALQ969Q0 106 aaKnown RBP8.84□□□□□ -0.99
USP11-206ENST00000469080 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
USP11-206ENST00000469080 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
USP11-206ENST00000469080 IGIPA6NJ69 53 aa8.83□□□□□ -1
USP11-206ENST00000469080 Q6JHZ5 121 aa8.83□□□□□ -1
USP11-206ENST00000469080 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
USP11-206ENST00000469080 C1orf158Q8N1D5 194 aa8.82□□□□□ -1
USP11-206ENST00000469080 TMEM141Q96I45 108 aa8.82□□□□□ -1
USP11-206ENST00000469080 KIF25-AS1Q9Y6Z4 181 aa8.82□□□□□ -1
USP11-206ENST00000469080 IGLV10-54A0A075B6I4 117 aa8.82□□□□□ -1
USP11-206ENST00000469080 COX7A2LO14548 114 aa8.82□□□□□ -1
USP11-206ENST00000469080 C20orf203Q8NBC4 194 aa8.82□□□□□ -1
USP11-206ENST00000469080 IGHV4-4A0A075B6R2 117 aa8.81□□□□□ -1
USP11-206ENST00000469080 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
USP11-206ENST00000469080 FSHBP01225 129 aa8.81□□□□□ -1
USP11-206ENST00000469080 FAM19A1Q7Z5A9 133 aa8.81□□□□□ -1
USP11-206ENST00000469080 MIAQ16674 131 aa8.8□□□□□ -1
USP11-206ENST00000469080 F8WEM9 126 aa8.8□□□□□ -1
USP11-206ENST00000469080 RPL28P46779 137 aaKnown RBP8.8□□□□□ -1
USP11-206ENST00000469080 COPS9Q8WXC6 57 aa8.8□□□□□ -1
USP11-206ENST00000469080 PKD1L1Q8TDX9 2849 aa8.8□□□□□ -1
USP11-206ENST00000469080 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
USP11-206ENST00000469080 UBE2D4Q9Y2X8 147 aa8.79□□□□□ -1
USP11-206ENST00000469080 H7BZZ5 65 aa8.79□□□□□ -1
USP11-206ENST00000469080 RMI2Q96E14 147 aa8.79□□□□□ -1
USP11-206ENST00000469080 CCKP06307 115 aa8.78□□□□□ -1
USP11-206ENST00000469080 LYPD5Q6UWN5 251 aa8.78□□□□□ -1
USP11-206ENST00000469080 AKAP9Q99996 3911 aa8.78□□□□□ -1
USP11-206ENST00000469080 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
USP11-206ENST00000469080 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
USP11-206ENST00000469080 ENHOQ6UWT2 76 aa8.78□□□□□ -1
USP11-206ENST00000469080 TIMM17AQ99595 171 aa8.78□□□□□ -1
USP11-206ENST00000469080 LITAFQ99732 161 aa8.77□□□□□ -1.01
USP11-206ENST00000469080 TRBV27A0A0K0K1C4 114 aa8.77□□□□□ -1.01
USP11-206ENST00000469080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.77□□□□□ -1.01
USP11-206ENST00000469080 MED14OSP0DP75 135 aa8.76□□□□□ -1.01
USP11-206ENST00000469080 Q8N2B8 174 aa8.76□□□□□ -1.01
USP11-206ENST00000469080 RNASE1P07998 156 aaKnown RBP8.75□□□□□ -1.01
USP11-206ENST00000469080 GYPEP15421 78 aa8.75□□□□□ -1.01
USP11-206ENST00000469080 FAM218AQ96MZ4 157 aa8.75□□□□□ -1.01
USP11-206ENST00000469080 KRTAP1-1Q07627 177 aa8.75□□□□□ -1.01
USP11-206ENST00000469080 KLK9Q2XQG4 91 aa8.75□□□□□ -1.01
USP11-206ENST00000469080 C9orf129Q5T035 196 aaKnown RBP8.74□□□□□ -1.01
USP11-206ENST00000469080 ZNF561-AS1K7EIQ3 104 aa8.74□□□□□ -1.01
USP11-206ENST00000469080 Q9H8V8 135 aa8.74□□□□□ -1.01
USP11-206ENST00000469080 K7EQD1 137 aa8.74□□□□□ -1.01
USP11-206ENST00000469080 NCR3O14931 201 aa8.74□□□□□ -1.01
USP11-206ENST00000469080 PAX4O43316 350 aa8.74□□□□□ -1.01
USP11-206ENST00000469080 MRPL55Q7Z7F7 128 aaKnown RBP8.74□□□□□ -1.01
USP11-206ENST00000469080 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
USP11-206ENST00000469080 KRTAP10-3P60369 221 aa8.73□□□□□ -1.01
USP11-206ENST00000469080 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
USP11-206ENST00000469080 LINC00158P58513 81 aa8.72□□□□□ -1.01
USP11-206ENST00000469080 MRPS36P82909 103 aaKnown RBP8.72□□□□□ -1.01
USP11-206ENST00000469080 COX6A2Q02221 97 aa8.72□□□□□ -1.01
USP11-206ENST00000469080 FAM222AQ5U5X8 452 aa8.72□□□□□ -1.01
USP11-206ENST00000469080 A0A087WZ39 114 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 DAD1P61803 113 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 CD164Q04900 197 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 C11orf72Q8NBR9 251 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 C22orf24Q9Y442 160 aa8.71□□□□□ -1.01
USP11-206ENST00000469080 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
USP11-206ENST00000469080 Q8N3U1 123 aa8.7□□□□□ -1.02
USP11-206ENST00000469080 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms