RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
XRN1-203ENST00000463916 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
XRN1-203ENST00000463916 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.12
XRN1-203ENST00000463916 PMCHL1Q16048 86 aa8.02□□□□□ -1.12
XRN1-203ENST00000463916 C6orf226Q5I0X4 101 aa8.02□□□□□ -1.12
XRN1-203ENST00000463916 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 PRSS2P07478 247 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 MT1HL1P0DM35 61 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 PMVKQ15126 192 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 Q8IZM0 81 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 LINC00469Q8N7U9 141 aa8.02□□□□□ -1.13
XRN1-203ENST00000463916 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 PACRGQ96M98 296 aaPredicted RBP8.01□□□□□ -1.13
XRN1-203ENST00000463916 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 CKS1BP61024 79 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 CBLN2Q8IUK8 224 aa8.01□□□□□ -1.13
XRN1-203ENST00000463916 SRSF9Q13242 221 aaKnown RBP eCLIP8□□□□□ -1.13
XRN1-203ENST00000463916 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
XRN1-203ENST00000463916 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
XRN1-203ENST00000463916 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
XRN1-203ENST00000463916 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 PDZD11Q5EBL8 140 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 TNXBP22105 4242 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 F8VRH5 84 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 HBDP02042 147 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 NDUFA6P56556 154 aa7.98□□□□□ -1.13
XRN1-203ENST00000463916 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
XRN1-203ENST00000463916 COX7B2Q8TF08 81 aa7.96□□□□□ -1.13
XRN1-203ENST00000463916 IGLC3P0DOY3 106 aa7.96□□□□□ -1.14
XRN1-203ENST00000463916 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
XRN1-203ENST00000463916 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
XRN1-203ENST00000463916 RAB5BP61020 215 aa7.95□□□□□ -1.14
XRN1-203ENST00000463916 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
XRN1-203ENST00000463916 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
XRN1-203ENST00000463916 M0QXV9 152 aa7.94□□□□□ -1.14
XRN1-203ENST00000463916 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
XRN1-203ENST00000463916 ZNF22P17026 224 aaPredicted RBP7.94□□□□□ -1.14
XRN1-203ENST00000463916 CXCL5P42830 114 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 ATP5LO75964 103 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 TRGC2P03986 189 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 ODF1Q14990 250 aa7.93□□□□□ -1.14
XRN1-203ENST00000463916 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
XRN1-203ENST00000463916 H3BRM9 83 aa7.92□□□□□ -1.14
XRN1-203ENST00000463916 CHCHD1Q96BP2 118 aaKnown RBP7.92□□□□□ -1.14
XRN1-203ENST00000463916 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
XRN1-203ENST00000463916 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
XRN1-203ENST00000463916 FAM19A2Q8N3H0 131 aa7.9□□□□□ -1.14
XRN1-203ENST00000463916 KRTAP10-8P60410 259 aa7.9□□□□□ -1.15
XRN1-203ENST00000463916 UBE2BP63146 152 aa7.9□□□□□ -1.15
XRN1-203ENST00000463916 REG3GQ6UW15 175 aa7.9□□□□□ -1.15
XRN1-203ENST00000463916 COLCA2A8K830 154 aa7.89□□□□□ -1.15
XRN1-203ENST00000463916 LINC00310P59036 64 aa7.89□□□□□ -1.15
XRN1-203ENST00000463916 TMEM170BQ5T4T1 132 aa7.88□□□□□ -1.15
XRN1-203ENST00000463916 IFI27L1Q96BM0 104 aa7.88□□□□□ -1.15
XRN1-203ENST00000463916 CHTOPQ9Y3Y2 248 aaKnown RBP7.88□□□□□ -1.15
XRN1-203ENST00000463916 HSBP1O75506 76 aa7.87□□□□□ -1.15
XRN1-203ENST00000463916 NUPR1O60356 82 aa7.87□□□□□ -1.15
XRN1-203ENST00000463916 PFN2P35080 140 aa7.87□□□□□ -1.15
XRN1-203ENST00000463916 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
XRN1-203ENST00000463916 SERF1AO75920 110 aa7.86□□□□□ -1.15
XRN1-203ENST00000463916 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
XRN1-203ENST00000463916 ZNF625Q96I27 306 aaPredicted RBP7.86□□□□□ -1.15
XRN1-203ENST00000463916 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
XRN1-203ENST00000463916 DIRC1Q969H9 104 aa7.85□□□□□ -1.15
XRN1-203ENST00000463916 TP73-AS1Q9UF72 201 aa7.85□□□□□ -1.15
XRN1-203ENST00000463916 TMEM223A0PJW6 202 aa7.84□□□□□ -1.15
XRN1-203ENST00000463916 H0Y9J4 135 aa7.84□□□□□ -1.15
XRN1-203ENST00000463916 LBHQ53QV2 105 aaPredicted RBP7.84□□□□□ -1.15
XRN1-203ENST00000463916 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
XRN1-203ENST00000463916 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
XRN1-203ENST00000463916 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
XRN1-203ENST00000463916 SCO1O75880 301 aa7.83□□□□□ -1.16
XRN1-203ENST00000463916 GAGE10A6NGK3 116 aa7.83□□□□□ -1.16
XRN1-203ENST00000463916 H0Y8G0 127 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 SND1-IT1Q9HBX3 110 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 UBR4Q5T4S7 5183 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 Q8NDZ9 215 aa7.82□□□□□ -1.16
XRN1-203ENST00000463916 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
XRN1-203ENST00000463916 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
XRN1-203ENST00000463916 ZNF861PO60384 105 aa7.8□□□□□ -1.16
XRN1-203ENST00000463916 COX17Q14061 63 aa7.8□□□□□ -1.16
XRN1-203ENST00000463916 FABP4P15090 132 aa7.8□□□□□ -1.16
XRN1-203ENST00000463916 VPREB1P12018 145 aa7.79□□□□□ -1.16
XRN1-203ENST00000463916 NKAPP1Q8N9T2 125 aa7.79□□□□□ -1.16
XRN1-203ENST00000463916 A0A0U1RRA0 63 aa7.79□□□□□ -1.16
XRN1-203ENST00000463916 BCE1O60756 84 aa7.78□□□□□ -1.16
XRN1-203ENST00000463916 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
XRN1-203ENST00000463916 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
XRN1-203ENST00000463916 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
XRN1-203ENST00000463916 PMCHL2Q9BQD1 86 aa7.77□□□□□ -1.17
XRN1-203ENST00000463916 LINC00158P58513 81 aa7.77□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BKO60814 126 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms