RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
LINC00960-201ENST00000463183 Q6ZRP5 223 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 PHF5AQ7RTV0 110 aaKnown RBP11.19□□□□□ -0.62
LINC00960-201ENST00000463183 ERASQ7Z444 233 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
LINC00960-201ENST00000463183 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
LINC00960-201ENST00000463183 RAB5BP61020 215 aa11.18□□□□□ -0.62
LINC00960-201ENST00000463183 HERVK_113P63121 156 aa11.18□□□□□ -0.62
LINC00960-201ENST00000463183 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
LINC00960-201ENST00000463183 CKS1BP61024 79 aa11.17□□□□□ -0.62
LINC00960-201ENST00000463183 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
LINC00960-201ENST00000463183 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
LINC00960-201ENST00000463183 LINC00469Q8N7U9 141 aa11.17□□□□□ -0.62
LINC00960-201ENST00000463183 SEC11AP67812 179 aa11.16□□□□□ -0.62
LINC00960-201ENST00000463183 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
LINC00960-201ENST00000463183 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
LINC00960-201ENST00000463183 TRBV30A0A0K0K1B3 111 aa11.15□□□□□ -0.62
LINC00960-201ENST00000463183 LINC00310P59036 64 aa11.15□□□□□ -0.62
LINC00960-201ENST00000463183 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
LINC00960-201ENST00000463183 TLX1NBP0CAT3 122 aa11.14□□□□□ -0.63
LINC00960-201ENST00000463183 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
LINC00960-201ENST00000463183 A0A096LNJ9 63 aa11.13□□□□□ -0.63
LINC00960-201ENST00000463183 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
LINC00960-201ENST00000463183 Q8IZM0 81 aa11.13□□□□□ -0.63
LINC00960-201ENST00000463183 PSORS1C2Q9UIG4 136 aa11.13□□□□□ -0.63
LINC00960-201ENST00000463183 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
LINC00960-201ENST00000463183 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
LINC00960-201ENST00000463183 SERF1AO75920 110 aa11.12□□□□□ -0.63
LINC00960-201ENST00000463183 NDUFA6P56556 154 aa11.12□□□□□ -0.63
LINC00960-201ENST00000463183 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
LINC00960-201ENST00000463183 NUPR1O60356 82 aa11.11□□□□□ -0.63
LINC00960-201ENST00000463183 PMVKQ15126 192 aa11.11□□□□□ -0.63
LINC00960-201ENST00000463183 PMCHL1Q16048 86 aa11.11□□□□□ -0.63
LINC00960-201ENST00000463183 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
LINC00960-201ENST00000463183 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
LINC00960-201ENST00000463183 TINCRA0A1B0GVN0 87 aa11.1□□□□□ -0.63
LINC00960-201ENST00000463183 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
LINC00960-201ENST00000463183 MT1HL1P0DM35 61 aa11.1□□□□□ -0.63
LINC00960-201ENST00000463183 SPINK6Q6UWN8 80 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 M0QXV9 152 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 HSBP1O75506 76 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 HBDP02042 147 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 UBE2BP63146 152 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 PDZD11Q5EBL8 140 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
LINC00960-201ENST00000463183 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
LINC00960-201ENST00000463183 F8VRH5 84 aa11.08□□□□□ -0.64
LINC00960-201ENST00000463183 COX7B2Q8TF08 81 aa11.08□□□□□ -0.64
LINC00960-201ENST00000463183 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
LINC00960-201ENST00000463183 TNXBP22105 4242 aa11.07□□□□□ -0.64
LINC00960-201ENST00000463183 REG3GQ6UW15 175 aa11.07□□□□□ -0.64
LINC00960-201ENST00000463183 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
LINC00960-201ENST00000463183 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00960-201ENST00000463183 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
LINC00960-201ENST00000463183 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
LINC00960-201ENST00000463183 IGLV5-45A0A087WSX0 123 aa11.05□□□□□ -0.64
LINC00960-201ENST00000463183 CXCL5P42830 114 aa11.05□□□□□ -0.64
LINC00960-201ENST00000463183 PLA2G2DQ9UNK4 145 aa11.05□□□□□ -0.64
LINC00960-201ENST00000463183 H3BRM9 83 aa11.04□□□□□ -0.64
LINC00960-201ENST00000463183 LINC01600Q96MT4 127 aa11.03□□□□□ -0.64
LINC00960-201ENST00000463183 ATP5LO75964 103 aa11.02□□□□□ -0.65
LINC00960-201ENST00000463183 ODF1Q14990 250 aa11.02□□□□□ -0.65
LINC00960-201ENST00000463183 IGLV7-43P04211 117 aa11.01□□□□□ -0.65
LINC00960-201ENST00000463183 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
LINC00960-201ENST00000463183 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
LINC00960-201ENST00000463183 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
LINC00960-201ENST00000463183 IFI27L1Q96BM0 104 aa10.99□□□□□ -0.65
LINC00960-201ENST00000463183 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
LINC00960-201ENST00000463183 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
LINC00960-201ENST00000463183 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
LINC00960-201ENST00000463183 C5orf52A6NGY3 159 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 C11orf86A6NJI1 115 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 S100A6P06703 90 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 PFN2P35080 140 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 DIRC1Q969H9 104 aa10.96□□□□□ -0.65
LINC00960-201ENST00000463183 FABP4P15090 132 aa10.95□□□□□ -0.66
LINC00960-201ENST00000463183 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
LINC00960-201ENST00000463183 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
LINC00960-201ENST00000463183 SNRPEP62304 92 aaKnown RBP10.94□□□□□ -0.66
LINC00960-201ENST00000463183 LBHQ53QV2 105 aaPredicted RBP10.94□□□□□ -0.66
LINC00960-201ENST00000463183 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
LINC00960-201ENST00000463183 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
LINC00960-201ENST00000463183 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
LINC00960-201ENST00000463183 H0Y9J4 135 aa10.92□□□□□ -0.66
LINC00960-201ENST00000463183 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
LINC00960-201ENST00000463183 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
LINC00960-201ENST00000463183 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
LINC00960-201ENST00000463183 H0Y8G0 127 aa10.91□□□□□ -0.66
LINC00960-201ENST00000463183 HIST1H2BLQ99880 126 aa10.91□□□□□ -0.66
LINC00960-201ENST00000463183 UBR4Q5T4S7 5183 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms