RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	COLCA2	A8K830	154 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507		H0Y8G0	127 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507	SPINK8	P0C7L1	97 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507	C2orf82	Q6UX34	121 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507	LINC01561	Q8N1V8	128 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507	LINC00474	Q9P2X8	69 aa		8.06	□□□□□ -1.12
FDPS-204	ENST00000461507		F8WDY8	70 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507		H3BRM9	83 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	HNRNPA3	P51991	378 aa	Known RBP	8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	PDZD11	Q5EBL8	140 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	C10orf25	Q5T742	122 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	FAM19A3	Q7Z5A8	133 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	FAM19A2	Q8N3H0	131 aa		8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	MRPL35	Q9NZE8	188 aa	Known RBP	8.05	□□□□□ -1.12
FDPS-204	ENST00000461507	SERF1A	O75920	110 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	PTTG1IP	P53801	180 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	GAGE2E	Q4V326	116 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	C7orf33	Q8WU49	177 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	C6orf48	Q9UBA6	75 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	GAGE2D	Q9UEU5	116 aa		8.04	□□□□□ -1.12
FDPS-204	ENST00000461507	KIAA0087	Q14695	138 aa		8.03	□□□□□ -1.12
FDPS-204	ENST00000461507	TMEM170B	Q5T4T1	132 aa		8.03	□□□□□ -1.12
FDPS-204	ENST00000461507		Q8IZM0	81 aa		8.03	□□□□□ -1.12
FDPS-204	ENST00000461507	IFI27L1	Q96BM0	104 aa		8.03	□□□□□ -1.12
FDPS-204	ENST00000461507	TRBV30	A0A0K0K1B3	111 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	SMIM1	B2RUZ4	78 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	IGLC3	P0DOY3	106 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	RNF151	Q2KHN1	245 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	SERTAD4-AS1	Q5TG53	156 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	COX7B2	Q8TF08	81 aa		8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	CHTOP	Q9Y3Y2	248 aa	Known RBP	8.02	□□□□□ -1.13
FDPS-204	ENST00000461507	C9orf116	Q5BN46	136 aa	Predicted RBP	8.01	□□□□□ -1.13
FDPS-204	ENST00000461507	PLAC8	Q9NZF1	115 aa		8.01	□□□□□ -1.13
FDPS-204	ENST00000461507	IGLV5-45	A0A087WSX0	123 aa		8	□□□□□ -1.13
FDPS-204	ENST00000461507	LEPROTL1	O95214	131 aa		8	□□□□□ -1.13
FDPS-204	ENST00000461507	FABP4	P15090	132 aa		8	□□□□□ -1.13
FDPS-204	ENST00000461507	ZNF22	P17026	224 aa	Predicted RBP	8	□□□□□ -1.13
FDPS-204	ENST00000461507	CXCL5	P42830	114 aa		8	□□□□□ -1.13
FDPS-204	ENST00000461507	C11orf86	A6NJI1	115 aa		7.99	□□□□□ -1.13
FDPS-204	ENST00000461507		F8VRH5	84 aa		7.99	□□□□□ -1.13
FDPS-204	ENST00000461507		Q6ZRP5	223 aa		7.99	□□□□□ -1.13
FDPS-204	ENST00000461507	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.99	□□□□□ -1.13
FDPS-204	ENST00000461507	HSPB8	Q9UJY1	196 aa		7.98	□□□□□ -1.13
FDPS-204	ENST00000461507		A0A1W2PNN7	141 aa		7.97	□□□□□ -1.13
FDPS-204	ENST00000461507	NDUFC2-KCTD14	E9PQ53	114 aa		7.97	□□□□□ -1.13
FDPS-204	ENST00000461507	MT1HL1	P0DM35	61 aa		7.97	□□□□□ -1.13
FDPS-204	ENST00000461507	TRAV12-1	A0A0B4J245	112 aa		7.96	□□□□□ -1.14
FDPS-204	ENST00000461507	NUPR1	O60356	82 aa		7.96	□□□□□ -1.14
FDPS-204	ENST00000461507	TLX1NB	P0CAT3	122 aa		7.96	□□□□□ -1.14
FDPS-204	ENST00000461507	LINC00310	P59036	64 aa		7.96	□□□□□ -1.14
FDPS-204	ENST00000461507	FAM168B	A1KXE4	195 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BK	O60814	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	ATP6V1G1	O75348	118 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BJ	P06899	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	S100A1	P23297	94 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BO	P23527	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BB	P33778	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BD	P58876	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BC	P62807	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST2H2BE	Q16778	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BH	Q93079	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BN	Q99877	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	HIST1H2BM	Q99879	126 aa		7.95	□□□□□ -1.14
FDPS-204	ENST00000461507	PHF5A	Q7RTV0	110 aa	Known RBP	7.94	□□□□□ -1.14
FDPS-204	ENST00000461507	ZNF625	Q96I27	306 aa	Predicted RBP	7.94	□□□□□ -1.14
FDPS-204	ENST00000461507	XAGE1A	Q9HD64	81 aa		7.94	□□□□□ -1.14
FDPS-204	ENST00000461507	TNXB	P22105	4242 aa		7.94	□□□□□ -1.14
FDPS-204	ENST00000461507	PFN2	P35080	140 aa		7.93	□□□□□ -1.14
FDPS-204	ENST00000461507	UBE2B	P63146	152 aa		7.93	□□□□□ -1.14
FDPS-204	ENST00000461507	PMCHL2	Q9BQD1	86 aa		7.93	□□□□□ -1.14
FDPS-204	ENST00000461507	MAP1LC3C	Q9BXW4	147 aa		7.93	□□□□□ -1.14
FDPS-204	ENST00000461507	PLA2G2D	Q9UNK4	145 aa		7.93	□□□□□ -1.14
FDPS-204	ENST00000461507		M0QXV9	152 aa		7.92	□□□□□ -1.14
FDPS-204	ENST00000461507	ODF1	Q14990	250 aa		7.92	□□□□□ -1.14
FDPS-204	ENST00000461507	C9orf129	Q5T035	196 aa	Known RBP	7.92	□□□□□ -1.14
FDPS-204	ENST00000461507	UBR4	Q5T4S7	5183 aa		7.92	□□□□□ -1.14
FDPS-204	ENST00000461507	IGLV5-39	A0A0G2JS06	123 aa		7.91	□□□□□ -1.14
FDPS-204	ENST00000461507	TMEM223	A0PJW6	202 aa		7.91	□□□□□ -1.14
FDPS-204	ENST00000461507	PRR3	P79522	188 aa	Known RBP	7.91	□□□□□ -1.14
FDPS-204	ENST00000461507		A0A0U1RRA0	63 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	DPM2	O94777	84 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	PLN	P26678	52 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	HERVK_113	P61574	105 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	MEIG1	Q5JSS6	88 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	ERG28	Q9UKR5	140 aa		7.89	□□□□□ -1.15
FDPS-204	ENST00000461507	IGKC	P01834	107 aa		7.88	□□□□□ -1.15
FDPS-204	ENST00000461507	C1orf137	Q5JT78	98 aa		7.88	□□□□□ -1.15
FDPS-204	ENST00000461507	SFTA2	Q6UW10	78 aa		7.88	□□□□□ -1.15
FDPS-204	ENST00000461507	LINC00158	P58513	81 aa		7.87	□□□□□ -1.15
FDPS-204	ENST00000461507	NKAPP1	Q8N9T2	125 aa		7.87	□□□□□ -1.15
FDPS-204	ENST00000461507	PSORS1C2	Q9UIG4	136 aa		7.87	□□□□□ -1.15
FDPS-204	ENST00000461507	GAGE10	A6NGK3	116 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	SYS1-DBNDD2	H3BUS1	97 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	LGALS3	P17931	250 aa	Known RBP	7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	KRTDAP	P60985	99 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	LINC01600	Q96MT4	127 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	NDUFA12	Q9UI09	145 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	C22orf24	Q9Y442	160 aa		7.85	□□□□□ -1.15
FDPS-204	ENST00000461507	LBH	Q53QV2	105 aa	Predicted RBP	7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms