RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CXCL5P42830 114 aa10.27□□□□□ -0.76
NCL-207ENST00000461347 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
NCL-207ENST00000461347 PRR3P79522 188 aaKnown RBP10.27□□□□□ -0.77
NCL-207ENST00000461347 REG3AQ06141 175 aa10.27□□□□□ -0.77
NCL-207ENST00000461347 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
NCL-207ENST00000461347 C20orf197Q8N268 126 aa10.26□□□□□ -0.77
NCL-207ENST00000461347 LINC01006Q8NI28 216 aa10.26□□□□□ -0.77
NCL-207ENST00000461347 BRK1Q8WUW1 75 aa10.26□□□□□ -0.77
NCL-207ENST00000461347 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
NCL-207ENST00000461347 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
NCL-207ENST00000461347 LINC00482Q8N8I6 264 aa10.25□□□□□ -0.77
NCL-207ENST00000461347 WFDC9Q8NEX5 89 aa10.25□□□□□ -0.77
NCL-207ENST00000461347 TRBV7-7A0A0K0K1E9 115 aa10.25□□□□□ -0.77
NCL-207ENST00000461347 CAMK2N2Q96S95 79 aa10.24□□□□□ -0.77
NCL-207ENST00000461347 A0A087WZ39 114 aa10.24□□□□□ -0.77
NCL-207ENST00000461347 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
NCL-207ENST00000461347 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
NCL-207ENST00000461347 FASNP49327 2511 aaKnown RBP10.23□□□□□ -0.77
NCL-207ENST00000461347 SERP2Q8N6R1 65 aa10.23□□□□□ -0.77
NCL-207ENST00000461347 C9orf116Q5BN46 136 aaPredicted RBP10.22□□□□□ -0.77
NCL-207ENST00000461347 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
NCL-207ENST00000461347 SPART-AS1P0CW21 52 aa10.22□□□□□ -0.77
NCL-207ENST00000461347 NKAPP1Q8N9T2 125 aa10.21□□□□□ -0.77
NCL-207ENST00000461347 LINC00846Q9NV44 126 aa10.21□□□□□ -0.77
NCL-207ENST00000461347 COL12A1Q99715 3063 aa10.21□□□□□ -0.77
NCL-207ENST00000461347 DIRC1Q969H9 104 aa10.21□□□□□ -0.78
NCL-207ENST00000461347 FHL2Q14192 279 aa10.2□□□□□ -0.78
NCL-207ENST00000461347 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
NCL-207ENST00000461347 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
NCL-207ENST00000461347 FLNAP21333 2647 aaKnown RBP10.19□□□□□ -0.78
NCL-207ENST00000461347 Q6JHZ5 121 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 Q8IZM0 81 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 C9orf66Q5T8R8 295 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 Q6ZQY7 126 aa10.19□□□□□ -0.78
NCL-207ENST00000461347 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
NCL-207ENST00000461347 PRB2P02812 416 aaPredicted RBP10.18□□□□□ -0.78
NCL-207ENST00000461347 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
NCL-207ENST00000461347 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
NCL-207ENST00000461347 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.78
NCL-207ENST00000461347 CCKP06307 115 aa10.15□□□□□ -0.78
NCL-207ENST00000461347 ATP5EP2Q5VTU8 51 aa10.15□□□□□ -0.78
NCL-207ENST00000461347 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.79
NCL-207ENST00000461347 Q8N814 137 aa10.15□□□□□ -0.79
NCL-207ENST00000461347 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
NCL-207ENST00000461347 COX7BP24311 80 aa10.14□□□□□ -0.79
NCL-207ENST00000461347 SMCR5Q8TEV8 140 aa10.14□□□□□ -0.79
NCL-207ENST00000461347 MPLKIPQ8TAP9 179 aa10.14□□□□□ -0.79
NCL-207ENST00000461347 CHD6Q8TD26 2715 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 A8MTW9 85 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 NREPQ16612 68 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
NCL-207ENST00000461347 TMEM258P61165 79 aa10.12□□□□□ -0.79
NCL-207ENST00000461347 ZNF843Q8N446 348 aa10.12□□□□□ -0.79
NCL-207ENST00000461347 FLNCQ14315 2725 aa10.12□□□□□ -0.79
NCL-207ENST00000461347 DEFB121Q5J5C9 76 aa10.12□□□□□ -0.79
NCL-207ENST00000461347 FAM19A1Q7Z5A9 133 aa10.12□□□□□ -0.79
NCL-207ENST00000461347 F8P00451 2351 aa10.11□□□□□ -0.79
NCL-207ENST00000461347 HILS1P60008 231 aa10.11□□□□□ -0.79
NCL-207ENST00000461347 ASH1LQ9NR48 2969 aaKnown RBP10.11□□□□□ -0.79
NCL-207ENST00000461347 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
NCL-207ENST00000461347 PDE6GP18545 87 aa10.11□□□□□ -0.79
NCL-207ENST00000461347 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
NCL-207ENST00000461347 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
NCL-207ENST00000461347 SNURFQ9Y675 71 aa10.09□□□□□ -0.79
NCL-207ENST00000461347 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 F8WEM9 126 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 V9GYY9 64 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 J3QKU1 62 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 C6orf223Q8N319 242 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 COX17Q14061 63 aa10.08□□□□□ -0.8
NCL-207ENST00000461347 SMG1Q96Q15 3661 aaKnown RBP10.08□□□□□ -0.8
NCL-207ENST00000461347 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
NCL-207ENST00000461347 CFAP46Q8IYW2 2715 aa10.06□□□□□ -0.8
NCL-207ENST00000461347 FUSP35637 526 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■□□□□ 9.2
NCL-207ENST00000461347 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
NCL-207ENST00000461347 H3BQ85 93 aa10.06□□□□□ -0.8
NCL-207ENST00000461347 ETDCA0A1B0GVM5 59 aa10.05□□□□□ -0.8
NCL-207ENST00000461347 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
NCL-207ENST00000461347 FSHBP01225 129 aa10.05□□□□□ -0.8
NCL-207ENST00000461347 NDUFC2O95298 119 aa10.04□□□□□ -0.8
NCL-207ENST00000461347 GCN1Q92616 2671 aaKnown RBP10.04□□□□□ -0.8
NCL-207ENST00000461347 UBE2BP63146 152 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 SMR3AQ99954 134 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 RELNP78509 3460 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 LELP1Q5T871 98 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 HECTD1Q9ULT8 2610 aa10.03□□□□□ -0.8
NCL-207ENST00000461347 HRNRQ86YZ3 2850 aaPredicted RBP10.03□□□□□ -0.8
NCL-207ENST00000461347 ZNF73O43830 326 aaPredicted RBP10.03□□□□□ -0.8
NCL-207ENST00000461347 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
NCL-207ENST00000461347 BPY2O14599 106 aa10.02□□□□□ -0.81
NCL-207ENST00000461347 Q8N3U1 123 aa10.02□□□□□ -0.81
NCL-207ENST00000461347 MIFP14174 115 aa10.02□□□□□ -0.81
NCL-207ENST00000461347 CRYGAP11844 174 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms