RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 YPEL4Q96NS1 127 aa14.03□□□□□ -0.16
TRAF4-207ENST00000461195 CKS1BP61024 79 aa14.02□□□□□ -0.17
TRAF4-207ENST00000461195 PMVKQ15126 192 aa14.02□□□□□ -0.17
TRAF4-207ENST00000461195 C6orf226Q5I0X4 101 aa14.02□□□□□ -0.17
TRAF4-207ENST00000461195 LINC00469Q8N7U9 141 aa14.02□□□□□ -0.17
TRAF4-207ENST00000461195 URB1-AS1Q96HZ7 61 aa14.02□□□□□ -0.17
TRAF4-207ENST00000461195 FAT3Q8TDW7 4589 aa14□□□□□ -0.17
TRAF4-207ENST00000461195 RAB5BP61020 215 aa14□□□□□ -0.17
TRAF4-207ENST00000461195 GAGE2EQ4V326 116 aa14□□□□□ -0.17
TRAF4-207ENST00000461195 GAGE2DQ9UEU5 116 aa14□□□□□ -0.17
TRAF4-207ENST00000461195 A0A096LNJ9 63 aa13.99□□□□□ -0.17
TRAF4-207ENST00000461195 IGLV5-45A0A087WSX0 123 aa13.98□□□□□ -0.17
TRAF4-207ENST00000461195 NDUFC2-KCTD14E9PQ53 114 aa13.98□□□□□ -0.17
TRAF4-207ENST00000461195 HBDP02042 147 aa13.98□□□□□ -0.17
TRAF4-207ENST00000461195 SMIM1B2RUZ4 78 aa13.97□□□□□ -0.17
TRAF4-207ENST00000461195 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
TRAF4-207ENST00000461195 PDZD11Q5EBL8 140 aa13.96□□□□□ -0.17
TRAF4-207ENST00000461195 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
TRAF4-207ENST00000461195 PHF5AQ7RTV0 110 aaKnown RBP13.95□□□□□ -0.18
TRAF4-207ENST00000461195 HMCN2Q8NDA2 5059 aa13.95□□□□□ -0.18
TRAF4-207ENST00000461195 FAM168BA1KXE4 195 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 F8VRH5 84 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 CXCL5P42830 114 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 NDUFA6P56556 154 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 SERTAD4-AS1Q5TG53 156 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 SLC7A5P1Q8MH63 180 aa13.94□□□□□ -0.18
TRAF4-207ENST00000461195 FAM19A5Q7Z5A7 132 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-207ENST00000461195 ATP5LO75964 103 aa13.92□□□□□ -0.18
TRAF4-207ENST00000461195 COX7B2Q8TF08 81 aa13.92□□□□□ -0.18
TRAF4-207ENST00000461195 H3BRM9 83 aa13.91□□□□□ -0.18
TRAF4-207ENST00000461195 SPINK8P0C7L1 97 aa13.91□□□□□ -0.18
TRAF4-207ENST00000461195 IGLC3P0DOY3 106 aa13.91□□□□□ -0.18
TRAF4-207ENST00000461195 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
TRAF4-207ENST00000461195 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.18
TRAF4-207ENST00000461195 SPINK6Q6UWN8 80 aa13.9□□□□□ -0.18
TRAF4-207ENST00000461195 CHCHD1Q96BP2 118 aaKnown RBP13.9□□□□□ -0.18
TRAF4-207ENST00000461195 PSORS1C2Q9UIG4 136 aa13.9□□□□□ -0.18
TRAF4-207ENST00000461195 KRTAP7-1Q8IUC3 87 aa13.88□□□□□ -0.19
TRAF4-207ENST00000461195 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■□□□ 13.7
TRAF4-207ENST00000461195 M0QXV9 152 aa13.86□□□□□ -0.19
TRAF4-207ENST00000461195 BAGE3Q86Y29 109 aa13.86□□□□□ -0.19
TRAF4-207ENST00000461195 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-207ENST00000461195 C1orf137Q5JT78 98 aa13.85□□□□□ -0.19
TRAF4-207ENST00000461195 MT1HL1P0DM35 61 aa13.84□□□□□ -0.19
TRAF4-207ENST00000461195 TRGC2P03986 189 aa13.83□□□□□ -0.2
TRAF4-207ENST00000461195 XAGE1AQ9HD64 81 aa13.83□□□□□ -0.2
TRAF4-207ENST00000461195 IGLV5-39A0A0G2JS06 123 aa13.82□□□□□ -0.2
TRAF4-207ENST00000461195 REG3GQ6UW15 175 aa13.82□□□□□ -0.2
TRAF4-207ENST00000461195 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
TRAF4-207ENST00000461195 C11orf86A6NJI1 115 aa13.81□□□□□ -0.2
TRAF4-207ENST00000461195 UBE2BP63146 152 aa13.81□□□□□ -0.2
TRAF4-207ENST00000461195 KRTAP11-1Q8IUC1 163 aa13.81□□□□□ -0.2
TRAF4-207ENST00000461195 IFI27L1Q96BM0 104 aa13.81□□□□□ -0.2
TRAF4-207ENST00000461195 HSBP1O75506 76 aa13.8□□□□□ -0.2
TRAF4-207ENST00000461195 LINC01600Q96MT4 127 aa13.8□□□□□ -0.2
TRAF4-207ENST00000461195 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
TRAF4-207ENST00000461195 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
TRAF4-207ENST00000461195 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
TRAF4-207ENST00000461195 IGLV7-43P04211 117 aa13.78□□□□□ -0.2
TRAF4-207ENST00000461195 FAM19A2Q8N3H0 131 aa13.77□□□□□ -0.21
TRAF4-207ENST00000461195 C22orf24Q9Y442 160 aa13.77□□□□□ -0.21
TRAF4-207ENST00000461195 COLCA2A8K830 154 aa13.76□□□□□ -0.21
TRAF4-207ENST00000461195 ODF1Q14990 250 aa13.75□□□□□ -0.21
TRAF4-207ENST00000461195 LBHQ53QV2 105 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-207ENST00000461195 TP73-AS1Q9UF72 201 aa13.74□□□□□ -0.21
TRAF4-207ENST00000461195 SERF1AO75920 110 aa13.72□□□□□ -0.21
TRAF4-207ENST00000461195 DIRC1Q969H9 104 aa13.72□□□□□ -0.21
TRAF4-207ENST00000461195 PFN2P35080 140 aa13.71□□□□□ -0.21
TRAF4-207ENST00000461195 LINC00310P59036 64 aa13.71□□□□□ -0.21
TRAF4-207ENST00000461195 SFTA2Q6UW10 78 aa13.71□□□□□ -0.21
TRAF4-207ENST00000461195 MRPL55Q7Z7F7 128 aaKnown RBP13.71□□□□□ -0.21
TRAF4-207ENST00000461195 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
TRAF4-207ENST00000461195 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
TRAF4-207ENST00000461195 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
TRAF4-207ENST00000461195 TNXBP22105 4242 aa13.69□□□□□ -0.22
TRAF4-207ENST00000461195 COX17Q14061 63 aa13.68□□□□□ -0.22
TRAF4-207ENST00000461195 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-207ENST00000461195 NUPR1O60356 82 aa13.67□□□□□ -0.22
TRAF4-207ENST00000461195 KRTAP10-8P60410 259 aa13.67□□□□□ -0.22
TRAF4-207ENST00000461195 IGLV5-37A0A075B6J1 123 aa13.66□□□□□ -0.22
TRAF4-207ENST00000461195 H0Y8G0 127 aa13.66□□□□□ -0.22
TRAF4-207ENST00000461195 H0Y9J4 135 aa13.66□□□□□ -0.22
TRAF4-207ENST00000461195 NKAPP1Q8N9T2 125 aa13.65□□□□□ -0.22
TRAF4-207ENST00000461195 LINC00167Q96N53 147 aa13.65□□□□□ -0.22
TRAF4-207ENST00000461195 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
TRAF4-207ENST00000461195 SND1-IT1Q9HBX3 110 aa13.64□□□□□ -0.23
TRAF4-207ENST00000461195 SCO1O75880 301 aa13.63□□□□□ -0.23
TRAF4-207ENST00000461195 RPL37AP8A6NKH3 93 aa13.62□□□□□ -0.23
TRAF4-207ENST00000461195 FABP4P15090 132 aa13.62□□□□□ -0.23
TRAF4-207ENST00000461195 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
TRAF4-207ENST00000461195 ZNF861PO60384 105 aa13.6□□□□□ -0.23
TRAF4-207ENST00000461195 LINC00158P58513 81 aa13.59□□□□□ -0.23
TRAF4-207ENST00000461195 BCE1O60756 84 aa13.58□□□□□ -0.24
TRAF4-207ENST00000461195 PLNP26678 52 aa13.58□□□□□ -0.24
TRAF4-207ENST00000461195 RPL24P83731 157 aaKnown RBP13.58□□□□□ -0.24
TRAF4-207ENST00000461195 VPREB1P12018 145 aa13.57□□□□□ -0.24
TRAF4-207ENST00000461195 HIST1H2BKO60814 126 aa13.55□□□□□ -0.24
TRAF4-207ENST00000461195 DPM2O94777 84 aa13.55□□□□□ -0.24
TRAF4-207ENST00000461195 HIST1H2BJP06899 126 aa13.55□□□□□ -0.24
TRAF4-207ENST00000461195 HIST1H2BOP23527 126 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms