RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 ORMDL2Q53FV1 153 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 C5orf38Q86SI9 138 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 MCFD2Q8NI22 146 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 ORAOV1Q8WV07 137 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 CYTL1Q9NRR1 136 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 EPDR1Q9UM22 224 aa2.04□□□□□ -2.08
ECHDC1-211ENST00000460558 TRBV30A0A0K0K1B3 111 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 MUC21A0A140T8X8 626 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 SNAI2O43623 268 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 FAUP35544 74 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 CRIP1P50238 77 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 AQP4P55087 323 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 DEFA3P59666 94 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 UBE2G2P60604 165 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 NCS1P62166 190 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 PRLHP81277 87 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 Q86TA4 180 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 PLEKHB2Q96CS7 222 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 MARVELD1Q9BSK0 173 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 CCDC32Q9BV29 185 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 CDC42SE2Q9NRR3 84 aa2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 LSM5Q9Y4Y9 91 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-211ENST00000460558 C20orf202A1L168 122 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 IGSF23A1L1A6 192 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 C9orf170A2RU37 121 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 BPY2O14599 106 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 CXCL1P09341 107 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 RPL37P61927 97 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 Q5W150 140 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 LINC01551Q86U37 167 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 CNBD2Q96M20 576 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 TIMM17AQ99595 171 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 GNB1LQ9BYB4 327 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 ZFP30Q9Y2G7 519 aa2.02□□□□□ -2.09
ECHDC1-211ENST00000460558 TRAV13-1A0A0B4J241 112 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 ZNF727A8MUV8 499 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 IGLV6-57P01721 117 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 RPL23P62829 140 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 DEFB116Q30KQ4 102 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 FAM19A1Q7Z5A9 133 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 MRPL52Q86TS9 123 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 Q8N9L7 120 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 MRAP2Q96G30 205 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 WDR61Q9GZS3 305 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 XAGE1AQ9HD64 81 aa2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 ZNF706Q9Y5V0 76 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-211ENST00000460558 HMGB3O15347 200 aaKnown RBP2□□□□□ -2.09
ECHDC1-211ENST00000460558 RGS5O15539 181 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 GATCO43716 136 aaKnown RBP2□□□□□ -2.09
ECHDC1-211ENST00000460558 UPK1BO75841 260 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 ARL14EPLP0DKL9 152 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 SPRR2EP22531 72 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 SPRR2BP35325 72 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 SPRR2AP35326 72 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 NEDD8Q15843 81 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 LINC00469Q8N7U9 141 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 SPRR4Q96PI1 79 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 RAB26Q9ULW5 256 aa2□□□□□ -2.09
ECHDC1-211ENST00000460558 SMIM26A0A096LP01 95 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 PSPHP1O15172 72 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 FOXA3P55318 350 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 AP3S2P59780 193 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 VBP1P61758 197 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 UBE2G1P62253 170 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 SMAGPQ0VAQ4 97 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 C20orf166-AS1Q96NR2 134 aa1.99□□□□□ -2.09
ECHDC1-211ENST00000460558 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 A0A1W2PRE2 83 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 TMEM223A0PJW6 202 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 C7orf77A4D0Y5 90 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 A6NN06 94 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 I3L3M4 83 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 GCHFRP30047 84 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 MOBPQ13875 183 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 TAL2Q16559 108 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 RNASE13Q5GAN3 156 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 C2orf82Q6UX34 121 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 FAM231DQ6ZW35 169 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 HIST1H2BAQ96A08 127 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 FMC1Q96HJ9 113 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 FAM210AQ96ND0 272 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 C8orf17Q9NRJ1 99 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 TMEM167BQ9NRX6 74 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 V9GYY9 64 aa1.98□□□□□ -2.09
ECHDC1-211ENST00000460558 TRBV20-1A0A075B6N2 111 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 RAB19A4D1S5 217 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 K7EN84 100 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 LTAP01374 205 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 CDC34P49427 236 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 C6orf99Q4VX62 202 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 TOMM5Q8N4H5 51 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms