RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 Q8IZM0 81 aa9.41□□□□□ -0.9
ATG4B-213ENST00000460211 ATP5LO75964 103 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 NDUFA6P56556 154 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
ATG4B-213ENST00000460211 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
ATG4B-213ENST00000460211 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
ATG4B-213ENST00000460211 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
ATG4B-213ENST00000460211 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
ATG4B-213ENST00000460211 H3BRM9 83 aa9.38□□□□□ -0.91
ATG4B-213ENST00000460211 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
ATG4B-213ENST00000460211 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
ATG4B-213ENST00000460211 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
ATG4B-213ENST00000460211 A0A096LNJ9 63 aa9.37□□□□□ -0.91
ATG4B-213ENST00000460211 CXCL5P42830 114 aa9.37□□□□□ -0.91
ATG4B-213ENST00000460211 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
ATG4B-213ENST00000460211 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
ATG4B-213ENST00000460211 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
ATG4B-213ENST00000460211 Q6ZRP5 223 aa9.36□□□□□ -0.91
ATG4B-213ENST00000460211 BAGE3Q86Y29 109 aa9.36□□□□□ -0.91
ATG4B-213ENST00000460211 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
ATG4B-213ENST00000460211 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
ATG4B-213ENST00000460211 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
ATG4B-213ENST00000460211 F8VRH5 84 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 OXTP01178 125 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 TRGC2P03986 189 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
ATG4B-213ENST00000460211 HSBP1O75506 76 aa9.33□□□□□ -0.92
ATG4B-213ENST00000460211 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
ATG4B-213ENST00000460211 PRR3P79522 188 aaKnown RBP9.33□□□□□ -0.92
ATG4B-213ENST00000460211 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
ATG4B-213ENST00000460211 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
ATG4B-213ENST00000460211 CHTOPQ9Y3Y2 248 aaKnown RBP9.3□□□□□ -0.92
ATG4B-213ENST00000460211 COLCA2A8K830 154 aa9.29□□□□□ -0.92
ATG4B-213ENST00000460211 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
ATG4B-213ENST00000460211 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
ATG4B-213ENST00000460211 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
ATG4B-213ENST00000460211 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
ATG4B-213ENST00000460211 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
ATG4B-213ENST00000460211 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
ATG4B-213ENST00000460211 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
ATG4B-213ENST00000460211 IGLV5-39A0A0G2JS06 123 aa9.26□□□□□ -0.93
ATG4B-213ENST00000460211 C11orf86A6NJI1 115 aa9.26□□□□□ -0.93
ATG4B-213ENST00000460211 M0QXV9 152 aa9.26□□□□□ -0.93
ATG4B-213ENST00000460211 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
ATG4B-213ENST00000460211 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
ATG4B-213ENST00000460211 SERF1AO75920 110 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 UBE2BP63146 152 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
ATG4B-213ENST00000460211 C1orf137Q5JT78 98 aa9.24□□□□□ -0.93
ATG4B-213ENST00000460211 HSPB8Q9UJY1 196 aa9.24□□□□□ -0.93
ATG4B-213ENST00000460211 LBHQ53QV2 105 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-213ENST00000460211 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
ATG4B-213ENST00000460211 H0Y8G0 127 aa9.21□□□□□ -0.94
ATG4B-213ENST00000460211 SCO1O75880 301 aa9.21□□□□□ -0.94
ATG4B-213ENST00000460211 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
ATG4B-213ENST00000460211 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
ATG4B-213ENST00000460211 TMEM223A0PJW6 202 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 FABP4P15090 132 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 PFN2P35080 140 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 COX17Q14061 63 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 ODF1Q14990 250 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 C22orf24Q9Y442 160 aa9.2□□□□□ -0.94
ATG4B-213ENST00000460211 LINC00310P59036 64 aa9.19□□□□□ -0.94
ATG4B-213ENST00000460211 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
ATG4B-213ENST00000460211 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
ATG4B-213ENST00000460211 NUPR1O60356 82 aa9.18□□□□□ -0.94
ATG4B-213ENST00000460211 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
ATG4B-213ENST00000460211 MT1HL1P0DM35 61 aa9.18□□□□□ -0.94
ATG4B-213ENST00000460211 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
ATG4B-213ENST00000460211 PLNP26678 52 aa9.17□□□□□ -0.94
ATG4B-213ENST00000460211 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
ATG4B-213ENST00000460211 NKAPP1Q8N9T2 125 aa9.16□□□□□ -0.94
ATG4B-213ENST00000460211 DIRC1Q969H9 104 aa9.16□□□□□ -0.94
ATG4B-213ENST00000460211 MAP1LC3CQ9BXW4 147 aa9.16□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BKO60814 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BJP06899 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BOP23527 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BBP33778 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 LINC00158P58513 81 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BDP58876 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BCP62807 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-213ENST00000460211 KRTAP11-1Q8IUC1 163 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 LINC01600Q96MT4 127 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.94
ATG4B-213ENST00000460211 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
ATG4B-213ENST00000460211 ATP6V1G1O75348 118 aa9.14□□□□□ -0.95
ATG4B-213ENST00000460211 DPM2O94777 84 aa9.14□□□□□ -0.95
ATG4B-213ENST00000460211 HERV-K104P63124 156 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms