RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
HPS3-202ENST00000460120 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 PRO0255Q9UI72 69 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 A0A087WZ39 114 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 SNCGO76070 127 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 CCL18P55774 89 aa12.59□□□□□ -0.39
HPS3-202ENST00000460120 OR13C6PQ8NH95 151 aa12.58□□□□□ -0.4
HPS3-202ENST00000460120 LINC00269Q8N2A0 174 aa12.58□□□□□ -0.4
HPS3-202ENST00000460120 C15orf53Q8NAA6 179 aa12.57□□□□□ -0.4
HPS3-202ENST00000460120 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
HPS3-202ENST00000460120 IGHV4-28A0A0C4DH34 117 aa12.56□□□□□ -0.4
HPS3-202ENST00000460120 SS18Q15532 418 aa12.56□□□□□ -0.4
HPS3-202ENST00000460120 CITED1Q99966 193 aa12.56□□□□□ -0.4
HPS3-202ENST00000460120 HIVEP1P15822 2718 aa12.56□□□□□ -0.4
HPS3-202ENST00000460120 C9orf66Q5T8R8 295 aa12.55□□□□□ -0.4
HPS3-202ENST00000460120 ANGP03950 147 aaKnown RBP12.55□□□□□ -0.4
HPS3-202ENST00000460120 ATP5G1P05496 136 aa12.54□□□□□ -0.4
HPS3-202ENST00000460120 BAALC-AS2P0C853 105 aa12.54□□□□□ -0.4
HPS3-202ENST00000460120 DAD1P61803 113 aa12.54□□□□□ -0.4
HPS3-202ENST00000460120 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
HPS3-202ENST00000460120 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
HPS3-202ENST00000460120 TRAV13-2A0A0B4J235 113 aa12.53□□□□□ -0.4
HPS3-202ENST00000460120 PRR3P79522 188 aaKnown RBP12.53□□□□□ -0.4
HPS3-202ENST00000460120 TEP1Q99973 2627 aaKnown RBP12.53□□□□□ -0.4
HPS3-202ENST00000460120 PPDPFQ9H3Y8 114 aa12.53□□□□□ -0.4
HPS3-202ENST00000460120 A0A087WYN8 130 aa12.52□□□□□ -0.41
HPS3-202ENST00000460120 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
HPS3-202ENST00000460120 GAGE2EQ4V326 116 aa12.52□□□□□ -0.41
HPS3-202ENST00000460120 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.41
HPS3-202ENST00000460120 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
HPS3-202ENST00000460120 IBA57-AS1B1ANH7 110 aa12.51□□□□□ -0.41
HPS3-202ENST00000460120 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
HPS3-202ENST00000460120 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
HPS3-202ENST00000460120 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
HPS3-202ENST00000460120 LINC01600Q96MT4 127 aa12.49□□□□□ -0.41
HPS3-202ENST00000460120 CHCHD10Q8WYQ3 142 aaPredicted RBP12.48□□□□□ -0.41
HPS3-202ENST00000460120 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
HPS3-202ENST00000460120 SLPIP03973 132 aa12.48□□□□□ -0.41
HPS3-202ENST00000460120 MALP21145 153 aa12.48□□□□□ -0.41
HPS3-202ENST00000460120 RPL28P46779 137 aaKnown RBP12.48□□□□□ -0.41
HPS3-202ENST00000460120 APOC4P55056 127 aa12.47□□□□□ -0.41
HPS3-202ENST00000460120 C3orf56Q8N813 242 aa12.47□□□□□ -0.41
HPS3-202ENST00000460120 A0A1B0GUV1 79 aa12.47□□□□□ -0.41
HPS3-202ENST00000460120 REG3AQ06141 175 aa12.47□□□□□ -0.41
HPS3-202ENST00000460120 DNAL4O96015 105 aa12.46□□□□□ -0.41
HPS3-202ENST00000460120 TRACP01848 142 aa12.46□□□□□ -0.41
HPS3-202ENST00000460120 LECT2O14960 151 aa12.46□□□□□ -0.42
HPS3-202ENST00000460120 C22orf24Q9Y442 160 aa12.45□□□□□ -0.42
HPS3-202ENST00000460120 C9orf129Q5T035 196 aaKnown RBP12.45□□□□□ -0.42
HPS3-202ENST00000460120 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
HPS3-202ENST00000460120 Q8NAQ8 132 aa12.44□□□□□ -0.42
HPS3-202ENST00000460120 GAGE2AQ6NT46 116 aa12.43□□□□□ -0.42
HPS3-202ENST00000460120 Q8IZM0 81 aa12.43□□□□□ -0.42
HPS3-202ENST00000460120 C6orf223Q8N319 242 aa12.43□□□□□ -0.42
HPS3-202ENST00000460120 RETNQ9HD89 108 aa12.42□□□□□ -0.42
HPS3-202ENST00000460120 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
HPS3-202ENST00000460120 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
HPS3-202ENST00000460120 KLK12Q9UKR0 248 aa12.41□□□□□ -0.42
HPS3-202ENST00000460120 SMCR5Q8TEV8 140 aa12.4□□□□□ -0.42
HPS3-202ENST00000460120 NCR3O14931 201 aa12.4□□□□□ -0.42
HPS3-202ENST00000460120 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
HPS3-202ENST00000460120 OXLD1Q5BKU9 147 aa12.39□□□□□ -0.43
HPS3-202ENST00000460120 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
HPS3-202ENST00000460120 KIAA0087Q14695 138 aa12.39□□□□□ -0.43
HPS3-202ENST00000460120 C10orf25Q5T742 122 aa12.39□□□□□ -0.43
HPS3-202ENST00000460120 MIFP14174 115 aa12.37□□□□□ -0.43
HPS3-202ENST00000460120 UNQ6190/PRO20217Q6UXQ8 127 aa12.37□□□□□ -0.43
HPS3-202ENST00000460120 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
HPS3-202ENST00000460120 PKD1L1Q8TDX9 2849 aa12.36□□□□□ -0.43
HPS3-202ENST00000460120 FAM240AA0A1B0GVK7 77 aa12.36□□□□□ -0.43
HPS3-202ENST00000460120 Q8NDZ9 215 aa12.36□□□□□ -0.43
HPS3-202ENST00000460120 SPAG11BQ08648 103 aa12.34□□□□□ -0.43
HPS3-202ENST00000460120 H0YGX0 51 aa12.34□□□□□ -0.43
HPS3-202ENST00000460120 FLNBO75369 2602 aaKnown RBP12.32□□□□□ -0.44
HPS3-202ENST00000460120 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
HPS3-202ENST00000460120 LOC107984640A0A0U1RRK4 108 aa12.31□□□□□ -0.44
HPS3-202ENST00000460120 LELP1Q5T871 98 aa12.31□□□□□ -0.44
HPS3-202ENST00000460120 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
HPS3-202ENST00000460120 F8P00451 2351 aa12.31□□□□□ -0.44
HPS3-202ENST00000460120 CYSRT1A8MQ03 144 aa12.3□□□□□ -0.44
HPS3-202ENST00000460120 INAFM2P0DMQ5 153 aa12.3□□□□□ -0.44
HPS3-202ENST00000460120 S100A7L2Q5SY68 101 aa12.29□□□□□ -0.44
HPS3-202ENST00000460120 Q6Q795 121 aa12.29□□□□□ -0.44
HPS3-202ENST00000460120 ENHOQ6UWT2 76 aa12.29□□□□□ -0.44
HPS3-202ENST00000460120 ACYP1P07311 99 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 C6orf99Q4VX62 202 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 STAB1Q9NY15 2570 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 FAM236AA0A1B0GUQ0 79 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 FAM236BA0A1B0GV22 79 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
HPS3-202ENST00000460120 KRTAP10-11P60412 298 aa12.27□□□□□ -0.44
HPS3-202ENST00000460120 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.44
HPS3-202ENST00000460120 CXCL5P42830 114 aa12.27□□□□□ -0.45
HPS3-202ENST00000460120 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
HPS3-202ENST00000460120 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
HPS3-202ENST00000460120 WFDC9Q8NEX5 89 aa12.26□□□□□ -0.45
HPS3-202ENST00000460120 Q6ZTC4 211 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms