RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	GAGE2B	Q13066	116 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	GAGE2E	Q4V326	116 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	C6orf226	Q5I0X4	101 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058		Q6Q795	121 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	GAGE2D	Q9UEU5	116 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	C22orf24	Q9Y442	160 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	BAALC-AS2	P0C853	105 aa		11.69	□□□□□ -0.54
TOM1-210	ENST00000449058		Q8IZM0	81 aa		11.69	□□□□□ -0.54
TOM1-210	ENST00000449058	VWF	P04275	2813 aa		11.69	□□□□□ -0.54
TOM1-210	ENST00000449058		A0A096LPF7	62 aa		11.69	□□□□□ -0.54
TOM1-210	ENST00000449058	SMIM11B	Q8TCY0	68 aa		11.69	□□□□□ -0.54
TOM1-210	ENST00000449058	DEFB135	Q30KP9	77 aa		11.68	□□□□□ -0.54
TOM1-210	ENST00000449058	CLPSL2	Q6UWE3	100 aa		11.67	□□□□□ -0.54
TOM1-210	ENST00000449058	NBEAL2	Q6ZNJ1	2754 aa		11.66	□□□□□ -0.54
TOM1-210	ENST00000449058	APOC4	P55056	127 aa		11.66	□□□□□ -0.54
TOM1-210	ENST00000449058	C11orf68	Q9H3H3	251 aa	Known RBP	11.66	□□□□□ -0.54
TOM1-210	ENST00000449058	IGHV4-28	A0A0C4DH34	117 aa		11.65	□□□□□ -0.54
TOM1-210	ENST00000449058	INAFM1	C9JVW0	142 aa		11.65	□□□□□ -0.54
TOM1-210	ENST00000449058	DEFB4A	O15263	64 aa		11.65	□□□□□ -0.54
TOM1-210	ENST00000449058	ACYP1	P07311	99 aa		11.65	□□□□□ -0.54
TOM1-210	ENST00000449058	TTC32	Q5I0X7	151 aa		11.64	□□□□□ -0.55
TOM1-210	ENST00000449058	ANAPC13	Q9BS18	74 aa		11.64	□□□□□ -0.55
TOM1-210	ENST00000449058		H0YGX0	51 aa		11.64	□□□□□ -0.55
TOM1-210	ENST00000449058	LINC00269	Q8N2A0	174 aa		11.64	□□□□□ -0.55
TOM1-210	ENST00000449058		Q9HAA7	133 aa		11.64	□□□□□ -0.55
TOM1-210	ENST00000449058	CD164L2	Q6UWJ8	174 aa		11.63	□□□□□ -0.55
TOM1-210	ENST00000449058	DAD1	P61803	113 aa		11.63	□□□□□ -0.55
TOM1-210	ENST00000449058		A0A087WYN8	130 aa		11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	MAL	P21145	153 aa		11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	KIAA0087	Q14695	138 aa		11.62	□□□□□ -0.55
TOM1-210	ENST00000449058		Q8NAQ8	132 aa		11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	NHLRC4	P0CG21	123 aa	Predicted RBP	11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	NDUFV3	P56181	108 aa	Known RBP	11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	OTOG	Q6ZRI0	2925 aa		11.62	□□□□□ -0.55
TOM1-210	ENST00000449058	SMIM20	Q8N5G0	67 aa		11.61	□□□□□ -0.55
TOM1-210	ENST00000449058	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.61	□□□□□ -0.55
TOM1-210	ENST00000449058	CELA1	Q9UNI1	258 aa		11.61	□□□□□ -0.55
TOM1-210	ENST00000449058		Q8N3U1	123 aa		11.61	□□□□□ -0.55
TOM1-210	ENST00000449058	ATP5G1	P05496	136 aa		11.6	□□□□□ -0.55
TOM1-210	ENST00000449058	MIF	P14174	115 aa		11.6	□□□□□ -0.55
TOM1-210	ENST00000449058	NSD1	Q96L73	2696 aa	Predicted RBP	11.6	□□□□□ -0.55
TOM1-210	ENST00000449058	REG3A	Q06141	175 aa		11.6	□□□□□ -0.55
TOM1-210	ENST00000449058	NOTCH2	Q04721	2471 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	ANG	P03950	147 aa	Known RBP	11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	INAFM2	P0DMQ5	153 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	OR13C6P	Q8NH95	151 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	TENM1	Q9UKZ4	2725 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	TRBV7-7	A0A0K0K1E9	115 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	DNAL4	O96015	105 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	CXCL5	P42830	114 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058	SDIM1	Q6ZPB5	146 aa		11.59	□□□□□ -0.55
TOM1-210	ENST00000449058		B5MCH6	92 aa		11.58	□□□□□ -0.56
TOM1-210	ENST00000449058	COX17	Q14061	63 aa		11.58	□□□□□ -0.56
TOM1-210	ENST00000449058	IGLV10-54	A0A075B6I4	117 aa		11.56	□□□□□ -0.56
TOM1-210	ENST00000449058	SMCR5	Q8TEV8	140 aa		11.56	□□□□□ -0.56
TOM1-210	ENST00000449058	LECT2	O14960	151 aa		11.55	□□□□□ -0.56
TOM1-210	ENST00000449058	NDUFC2	O95298	119 aa		11.55	□□□□□ -0.56
TOM1-210	ENST00000449058	SPART-AS1	P0CW21	52 aa		11.55	□□□□□ -0.56
TOM1-210	ENST00000449058	WFDC9	Q8NEX5	89 aa		11.55	□□□□□ -0.56
TOM1-210	ENST00000449058	WIPF1	O43516	503 aa		11.54	□□□□□ -0.56
TOM1-210	ENST00000449058	NANOS2	P60321	138 aa	Known RBP	11.54	□□□□□ -0.56
TOM1-210	ENST00000449058	OBSCN-AS1	Q96MR7	158 aa		11.54	□□□□□ -0.56
TOM1-210	ENST00000449058	LELP1	Q5T871	98 aa		11.54	□□□□□ -0.56
TOM1-210	ENST00000449058	LINC00643	Q86TS7	51 aa		11.54	□□□□□ -0.56
TOM1-210	ENST00000449058	C9orf129	Q5T035	196 aa	Known RBP	11.53	□□□□□ -0.56
TOM1-210	ENST00000449058	IMUP	Q9GZP8	106 aa		11.53	□□□□□ -0.56
TOM1-210	ENST00000449058	IGHV4-30-4	P0DP06	118 aa		11.52	□□□□□ -0.57
TOM1-210	ENST00000449058	PRR3	P79522	188 aa	Known RBP	11.52	□□□□□ -0.57
TOM1-210	ENST00000449058	KLK5	Q9Y337	293 aa	Predicted RBP	11.52	□□□□□ -0.57
TOM1-210	ENST00000449058	C9orf116	Q5BN46	136 aa	Predicted RBP	11.51	□□□□□ -0.57
TOM1-210	ENST00000449058	HTN3	P15516	51 aa		11.5	□□□□□ -0.57
TOM1-210	ENST00000449058	GAGE2A	Q6NT46	116 aa		11.5	□□□□□ -0.57
TOM1-210	ENST00000449058	LINC00167	Q96N53	147 aa		11.5	□□□□□ -0.57
TOM1-210	ENST00000449058	PRR34	Q9NV39	138 aa		11.5	□□□□□ -0.57
TOM1-210	ENST00000449058	TMEM126A	Q9H061	195 aa		11.49	□□□□□ -0.57
TOM1-210	ENST00000449058	TEP1	Q99973	2627 aa	Known RBP	11.48	□□□□□ -0.57
TOM1-210	ENST00000449058		A0A1B0GX51	115 aa		11.48	□□□□□ -0.57
TOM1-210	ENST00000449058	SLPI	P03973	132 aa		11.48	□□□□□ -0.57
TOM1-210	ENST00000449058		Q8NDZ9	215 aa		11.48	□□□□□ -0.57
TOM1-210	ENST00000449058	C14orf132	Q9NPU4	83 aa		11.47	□□□□□ -0.57
TOM1-210	ENST00000449058	ORMDL1	Q9P0S3	153 aa		11.47	□□□□□ -0.57
TOM1-210	ENST00000449058	SPAG11B	Q08648	103 aa		11.47	□□□□□ -0.57
TOM1-210	ENST00000449058	MUC7	Q8TAX7	377 aa		11.47	□□□□□ -0.57
TOM1-210	ENST00000449058	ATR	Q13535	2644 aa		11.46	□□□□□ -0.57
TOM1-210	ENST00000449058	C10orf25	Q5T742	122 aa		11.46	□□□□□ -0.57
TOM1-210	ENST00000449058	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.46	□□□□□ -0.57
TOM1-210	ENST00000449058	C6orf223	Q8N319	242 aa		11.46	□□□□□ -0.58
TOM1-210	ENST00000449058	KLK12	Q9UKR0	248 aa		11.46	□□□□□ -0.58
TOM1-210	ENST00000449058	HIVEP1	P15822	2718 aa		11.45	□□□□□ -0.58
TOM1-210	ENST00000449058		A0A0J9YWU9	116 aa		11.45	□□□□□ -0.58
TOM1-210	ENST00000449058	ENHO	Q6UWT2	76 aa		11.45	□□□□□ -0.58
TOM1-210	ENST00000449058		Q8N814	137 aa		11.45	□□□□□ -0.58
TOM1-210	ENST00000449058	CCDC179	H3BU77	68 aa		11.45	□□□□□ -0.58
TOM1-210	ENST00000449058	NCR3	O14931	201 aa		11.44	□□□□□ -0.58
TOM1-210	ENST00000449058	LYPD5	Q6UWN5	251 aa		11.44	□□□□□ -0.58
TOM1-210	ENST00000449058	CYSRT1	A8MQ03	144 aa		11.43	□□□□□ -0.58
TOM1-210	ENST00000449058	FAM236A	A0A1B0GUQ0	79 aa		11.41	□□□□□ -0.58
TOM1-210	ENST00000449058	FAM236B	A0A1B0GV22	79 aa		11.41	□□□□□ -0.58
TOM1-210	ENST00000449058	C5orf47	Q569G3	176 aa		11.41	□□□□□ -0.58
TOM1-210	ENST00000449058	LINC00526	Q96FQ7	95 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms