RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 DEFB131BA0A096LNP1 70 aa13.43□□□□□ -0.26
SHANK3-203ENST00000445220 C1orf137Q5JT78 98 aa13.43□□□□□ -0.26
SHANK3-203ENST00000445220 HILS1P60008 231 aa13.42□□□□□ -0.26
SHANK3-203ENST00000445220 PTPRSQ13332 1948 aa13.42□□□□□ -0.26
SHANK3-203ENST00000445220 ATG2AQ2TAZ0 1938 aa13.42□□□□□ -0.26
SHANK3-203ENST00000445220 LINC01006Q8NI28 216 aa13.41□□□□□ -0.26
SHANK3-203ENST00000445220 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
SHANK3-203ENST00000445220 LINC01547P58512 204 aaPredicted RBP13.4□□□□□ -0.26
SHANK3-203ENST00000445220 UNQ6190/PRO20217Q6UXQ8 127 aa13.4□□□□□ -0.27
SHANK3-203ENST00000445220 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
SHANK3-203ENST00000445220 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
SHANK3-203ENST00000445220 SPINK6Q6UWN8 80 aa13.39□□□□□ -0.27
SHANK3-203ENST00000445220 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
SHANK3-203ENST00000445220 LINC00575Q6W349 94 aa13.37□□□□□ -0.27
SHANK3-203ENST00000445220 LINC01546A6NGU7 62 aa13.37□□□□□ -0.27
SHANK3-203ENST00000445220 EGFEM1PQ0D2K5 195 aa13.37□□□□□ -0.27
SHANK3-203ENST00000445220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
SHANK3-203ENST00000445220 ZNF706Q9Y5V0 76 aaPredicted RBP13.36□□□□□ -0.27
SHANK3-203ENST00000445220 CXCL6P80162 114 aa13.36□□□□□ -0.27
SHANK3-203ENST00000445220 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
SHANK3-203ENST00000445220 CDSNQ15517 529 aa13.36□□□□□ -0.27
SHANK3-203ENST00000445220 C4orf26Q17RF5 130 aa13.36□□□□□ -0.27
SHANK3-203ENST00000445220 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
SHANK3-203ENST00000445220 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
SHANK3-203ENST00000445220 BCE1O60756 84 aa13.34□□□□□ -0.27
SHANK3-203ENST00000445220 BRI3O95415 125 aa13.34□□□□□ -0.27
SHANK3-203ENST00000445220 COL5A1P20908 1838 aaPredicted RBP13.33□□□□□ -0.27
SHANK3-203ENST00000445220 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
SHANK3-203ENST00000445220 IGLV4-60A0A075B6I1 120 aa13.32□□□□□ -0.28
SHANK3-203ENST00000445220 LINC00337Q8N6G1 96 aa13.32□□□□□ -0.28
SHANK3-203ENST00000445220 MYO9AB2RTY4 2548 aa13.32□□□□□ -0.28
SHANK3-203ENST00000445220 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.31□□□□□ -0.28
SHANK3-203ENST00000445220 hDV103S1A0JD37 113 aa13.31□□□□□ -0.28
SHANK3-203ENST00000445220 KPRPQ5T749 579 aaPredicted RBP13.31□□□□□ -0.28
SHANK3-203ENST00000445220 SBSPONQ8IVN8 264 aa13.31□□□□□ -0.28
SHANK3-203ENST00000445220 KRTAP10-9P60411 292 aa13.3□□□□□ -0.28
SHANK3-203ENST00000445220 C10orf25Q5T742 122 aa13.3□□□□□ -0.28
SHANK3-203ENST00000445220 TRAV10A0A0B4J240 114 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 LIMD2Q9BT23 127 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 POLQO75417 2590 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 H0Y9P7 68 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 AVPP01185 164 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 C18orf65Q6ZTR6 163 aa13.29□□□□□ -0.28
SHANK3-203ENST00000445220 SMR3AQ99954 134 aa13.28□□□□□ -0.28
SHANK3-203ENST00000445220 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
SHANK3-203ENST00000445220 PCOTHQ58A44 107 aa13.26□□□□□ -0.29
SHANK3-203ENST00000445220 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
SHANK3-203ENST00000445220 PLAC8L1A1L4L8 177 aa13.25□□□□□ -0.29
SHANK3-203ENST00000445220 HCG22E2RYF7 251 aa13.25□□□□□ -0.29
SHANK3-203ENST00000445220 EDN2P20800 178 aa13.25□□□□□ -0.29
SHANK3-203ENST00000445220 ODF3L2Q3SX64 289 aa13.25□□□□□ -0.29
SHANK3-203ENST00000445220 KIF25-AS1Q9Y6Z4 181 aa13.24□□□□□ -0.29
SHANK3-203ENST00000445220 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
SHANK3-203ENST00000445220 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
SHANK3-203ENST00000445220 AGRNO00468 2067 aa13.23□□□□□ -0.29
SHANK3-203ENST00000445220 LINC01561Q8N1V8 128 aa13.22□□□□□ -0.29
SHANK3-203ENST00000445220 Q6ZSN1 163 aa13.21□□□□□ -0.29
SHANK3-203ENST00000445220 CPAMD8Q8IZJ3 1885 aa13.2□□□□□ -0.3
SHANK3-203ENST00000445220 A0A087WSZ3 146 aa13.19□□□□□ -0.3
SHANK3-203ENST00000445220 REG3GQ6UW15 175 aa13.19□□□□□ -0.3
SHANK3-203ENST00000445220 Q8N2B8 174 aa13.19□□□□□ -0.3
SHANK3-203ENST00000445220 A0A1B0GUV1 79 aa13.19□□□□□ -0.3
SHANK3-203ENST00000445220 FHL2Q14192 279 aa13.18□□□□□ -0.3
SHANK3-203ENST00000445220 A0A1W2PPR1 153 aa13.18□□□□□ -0.3
SHANK3-203ENST00000445220 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
SHANK3-203ENST00000445220 A8MTW9 85 aa13.17□□□□□ -0.3
SHANK3-203ENST00000445220 IGLV1-51P01701 117 aa13.17□□□□□ -0.3
SHANK3-203ENST00000445220 TLN2Q9Y4G6 2542 aa13.16□□□□□ -0.3
SHANK3-203ENST00000445220 LINC00474Q9P2X8 69 aa13.16□□□□□ -0.3
SHANK3-203ENST00000445220 IGHV6-1A0A0B4J1U7 121 aa13.16□□□□□ -0.3
SHANK3-203ENST00000445220 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
SHANK3-203ENST00000445220 SMIM29Q86T20 159 aa13.15□□□□□ -0.3
SHANK3-203ENST00000445220 MTORP42345 2549 aa13.15□□□□□ -0.3
SHANK3-203ENST00000445220 C1orf64Q8NEQ6 169 aa13.14□□□□□ -0.31
SHANK3-203ENST00000445220 DOPEY1Q5JWR5 2465 aa13.13□□□□□ -0.31
SHANK3-203ENST00000445220 C6orf223Q8N319 242 aa13.13□□□□□ -0.31
SHANK3-203ENST00000445220 F8WDY8 70 aa13.13□□□□□ -0.31
SHANK3-203ENST00000445220 FAM218AQ96MZ4 157 aa13.12□□□□□ -0.31
SHANK3-203ENST00000445220 Q9BRP9 147 aa13.12□□□□□ -0.31
SHANK3-203ENST00000445220 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
SHANK3-203ENST00000445220 LINC00315P59091 139 aa13.11□□□□□ -0.31
SHANK3-203ENST00000445220 DEFB116Q30KQ4 102 aa13.11□□□□□ -0.31
SHANK3-203ENST00000445220 C2orf48Q96LS8 159 aa13.1□□□□□ -0.31
SHANK3-203ENST00000445220 WDR87Q6ZQQ6 2873 aa13.1□□□□□ -0.31
SHANK3-203ENST00000445220 EXPH5Q8NEV8 1989 aa13.09□□□□□ -0.31
SHANK3-203ENST00000445220 SERTAD4-AS1Q5TG53 156 aa13.08□□□□□ -0.32
SHANK3-203ENST00000445220 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
SHANK3-203ENST00000445220 Q9UF83 564 aa13.08□□□□□ -0.32
SHANK3-203ENST00000445220 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
SHANK3-203ENST00000445220 IGHV3OR16-9A0A0B4J2B5 98 aa13.06□□□□□ -0.32
SHANK3-203ENST00000445220 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
SHANK3-203ENST00000445220 HECTD1Q9ULT8 2610 aa13.04□□□□□ -0.32
SHANK3-203ENST00000445220 F8P00451 2351 aa13.04□□□□□ -0.32
SHANK3-203ENST00000445220 Q6ZQT0 140 aa13.04□□□□□ -0.32
SHANK3-203ENST00000445220 A0A1B0GW54 56 aa13.03□□□□□ -0.32
SHANK3-203ENST00000445220 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
SHANK3-203ENST00000445220 LOC110117498A0A087WWA1 95 aa13.03□□□□□ -0.32
SHANK3-203ENST00000445220 VPREB1P12018 145 aa13.03□□□□□ -0.32
SHANK3-203ENST00000445220 OXLD1Q5BKU9 147 aa13.03□□□□□ -0.32
SHANK3-203ENST00000445220 KIAA0087Q14695 138 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms