RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
HNF4A-205ENST00000443598 TINCRA0A1B0GVN0 87 aa13.2□□□□□ -0.3
HNF4A-205ENST00000443598 C6orf226Q5I0X4 101 aa13.19□□□□□ -0.3
HNF4A-205ENST00000443598 NDUFC2-KCTD14E9PQ53 114 aa13.18□□□□□ -0.3
HNF4A-205ENST00000443598 CKS1BP61024 79 aa13.18□□□□□ -0.3
HNF4A-205ENST00000443598 C18orf32Q8TCD1 76 aa13.18□□□□□ -0.3
HNF4A-205ENST00000443598 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
HNF4A-205ENST00000443598 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
HNF4A-205ENST00000443598 PMVKQ15126 192 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 SPINK6Q6UWN8 80 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
HNF4A-205ENST00000443598 LINC00614P0C842 121 aa13.16□□□□□ -0.3
HNF4A-205ENST00000443598 CBLN2Q8IUK8 224 aa13.15□□□□□ -0.3
HNF4A-205ENST00000443598 CXCL5P42830 114 aa13.14□□□□□ -0.31
HNF4A-205ENST00000443598 SRSF9Q13242 221 aaKnown RBP eCLIP13.14□□□□□ -0.31
HNF4A-205ENST00000443598 PDZD11Q5EBL8 140 aa13.14□□□□□ -0.31
HNF4A-205ENST00000443598 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
HNF4A-205ENST00000443598 PHF5AQ7RTV0 110 aaKnown RBP13.14□□□□□ -0.31
HNF4A-205ENST00000443598 URB1-AS1Q96HZ7 61 aa13.14□□□□□ -0.31
HNF4A-205ENST00000443598 SMIM1B2RUZ4 78 aa13.13□□□□□ -0.31
HNF4A-205ENST00000443598 MT1HL1P0DM35 61 aa13.13□□□□□ -0.31
HNF4A-205ENST00000443598 RAB5BP61020 215 aa13.13□□□□□ -0.31
HNF4A-205ENST00000443598 YPEL4Q96NS1 127 aa13.13□□□□□ -0.31
HNF4A-205ENST00000443598 A0A096LNJ9 63 aa13.13□□□□□ -0.31
HNF4A-205ENST00000443598 FAM168BA1KXE4 195 aa13.12□□□□□ -0.31
HNF4A-205ENST00000443598 F8VRH5 84 aa13.12□□□□□ -0.31
HNF4A-205ENST00000443598 HBDP02042 147 aa13.12□□□□□ -0.31
HNF4A-205ENST00000443598 PSORS1C2Q9UIG4 136 aa13.12□□□□□ -0.31
HNF4A-205ENST00000443598 COLCA2A8K830 154 aa13.1□□□□□ -0.31
HNF4A-205ENST00000443598 C9orf129Q5T035 196 aaKnown RBP13.1□□□□□ -0.31
HNF4A-205ENST00000443598 FAM19A5Q7Z5A7 132 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-205ENST00000443598 LINC01600Q96MT4 127 aa13.1□□□□□ -0.31
HNF4A-205ENST00000443598 REG3GQ6UW15 175 aa13.09□□□□□ -0.31
HNF4A-205ENST00000443598 KRTAP7-1Q8IUC3 87 aa13.09□□□□□ -0.31
HNF4A-205ENST00000443598 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
HNF4A-205ENST00000443598 H3BRM9 83 aa13.08□□□□□ -0.32
HNF4A-205ENST00000443598 IGLC3P0DOY3 106 aa13.08□□□□□ -0.32
HNF4A-205ENST00000443598 ATP5LO75964 103 aa13.06□□□□□ -0.32
HNF4A-205ENST00000443598 C1orf137Q5JT78 98 aa13.06□□□□□ -0.32
HNF4A-205ENST00000443598 M0QXV9 152 aa13.06□□□□□ -0.32
HNF4A-205ENST00000443598 ODF1Q14990 250 aa13.06□□□□□ -0.32
HNF4A-205ENST00000443598 SPINK8P0C7L1 97 aa13.05□□□□□ -0.32
HNF4A-205ENST00000443598 PMCHL1Q16048 86 aa13.05□□□□□ -0.32
HNF4A-205ENST00000443598 TNXBP22105 4242 aa13.04□□□□□ -0.32
HNF4A-205ENST00000443598 NDUFA6P56556 154 aa13.04□□□□□ -0.32
HNF4A-205ENST00000443598 CHCHD1Q96BP2 118 aaKnown RBP13.03□□□□□ -0.32
HNF4A-205ENST00000443598 IGLV7-43P04211 117 aa13.02□□□□□ -0.33
HNF4A-205ENST00000443598 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
HNF4A-205ENST00000443598 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
HNF4A-205ENST00000443598 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-205ENST00000443598 UBE2BP63146 152 aa13.01□□□□□ -0.33
HNF4A-205ENST00000443598 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
HNF4A-205ENST00000443598 BAGE3Q86Y29 109 aa13□□□□□ -0.33
HNF4A-205ENST00000443598 HMCN2Q8NDA2 5059 aa13□□□□□ -0.33
HNF4A-205ENST00000443598 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
HNF4A-205ENST00000443598 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-205ENST00000443598 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
HNF4A-205ENST00000443598 KRTAP10-8P60410 259 aa12.96□□□□□ -0.33
HNF4A-205ENST00000443598 DIRC1Q969H9 104 aa12.96□□□□□ -0.33
HNF4A-205ENST00000443598 PLA2G2DQ9UNK4 145 aa12.96□□□□□ -0.33
HNF4A-205ENST00000443598 C11orf86A6NJI1 115 aa12.95□□□□□ -0.34
HNF4A-205ENST00000443598 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
HNF4A-205ENST00000443598 IFI27L1Q96BM0 104 aa12.95□□□□□ -0.34
HNF4A-205ENST00000443598 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
HNF4A-205ENST00000443598 TMEM170BQ5T4T1 132 aa12.93□□□□□ -0.34
HNF4A-205ENST00000443598 NUPR1O60356 82 aa12.92□□□□□ -0.34
HNF4A-205ENST00000443598 HSBP1O75506 76 aa12.92□□□□□ -0.34
HNF4A-205ENST00000443598 TRGC2P03986 189 aa12.92□□□□□ -0.34
HNF4A-205ENST00000443598 SFTA2Q6UW10 78 aa12.92□□□□□ -0.34
HNF4A-205ENST00000443598 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
HNF4A-205ENST00000443598 H0Y9J4 135 aa12.91□□□□□ -0.34
HNF4A-205ENST00000443598 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
HNF4A-205ENST00000443598 C5orf52A6NGY3 159 aa12.91□□□□□ -0.34
HNF4A-205ENST00000443598 COX17Q14061 63 aa12.9□□□□□ -0.34
HNF4A-205ENST00000443598 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
HNF4A-205ENST00000443598 ERG28Q9UKR5 140 aa12.88□□□□□ -0.35
HNF4A-205ENST00000443598 FAM19A2Q8N3H0 131 aa12.88□□□□□ -0.35
HNF4A-205ENST00000443598 PFN2P35080 140 aa12.87□□□□□ -0.35
HNF4A-205ENST00000443598 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
HNF4A-205ENST00000443598 ZNF625Q96I27 306 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-205ENST00000443598 ZNF861PO60384 105 aa12.85□□□□□ -0.35
HNF4A-205ENST00000443598 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
HNF4A-205ENST00000443598 S100A6P06703 90 aa12.84□□□□□ -0.35
HNF4A-205ENST00000443598 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
HNF4A-205ENST00000443598 SERF1AO75920 110 aa12.84□□□□□ -0.35
HNF4A-205ENST00000443598 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
HNF4A-205ENST00000443598 LINC00310P59036 64 aa12.83□□□□□ -0.36
HNF4A-205ENST00000443598 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
HNF4A-205ENST00000443598 LEPROTL1O95214 131 aa12.82□□□□□ -0.36
HNF4A-205ENST00000443598 BCE1O60756 84 aa12.81□□□□□ -0.36
HNF4A-205ENST00000443598 KRTAP1-4P0C5Y4 121 aa12.8□□□□□ -0.36
HNF4A-205ENST00000443598 AKR1D1P51857 326 aa12.8□□□□□ -0.36
HNF4A-205ENST00000443598 IGLV1-50A0A075B6I6 118 aa12.8□□□□□ -0.36
HNF4A-205ENST00000443598 RPL37AP8A6NKH3 93 aa12.8□□□□□ -0.36
HNF4A-205ENST00000443598 SMIM6P0DI80 62 aa12.8□□□□□ -0.36
HNF4A-205ENST00000443598 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
HNF4A-205ENST00000443598 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms