RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
CDKN3-204ENST00000442975 LINC01549A6NIU2 74 aa13.07□□□□□ -0.32
CDKN3-204ENST00000442975 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
CDKN3-204ENST00000442975 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
CDKN3-204ENST00000442975 Q8IZM0 81 aa13.05□□□□□ -0.32
CDKN3-204ENST00000442975 HMCN2Q8NDA2 5059 aa13.05□□□□□ -0.32
CDKN3-204ENST00000442975 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
CDKN3-204ENST00000442975 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
CDKN3-204ENST00000442975 PSORS1C2Q9UIG4 136 aa13.03□□□□□ -0.32
CDKN3-204ENST00000442975 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.33
CDKN3-204ENST00000442975 SMIM1B2RUZ4 78 aa13.01□□□□□ -0.33
CDKN3-204ENST00000442975 MT1HL1P0DM35 61 aa13.01□□□□□ -0.33
CDKN3-204ENST00000442975 PMVKQ15126 192 aa13.01□□□□□ -0.33
CDKN3-204ENST00000442975 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
CDKN3-204ENST00000442975 M0QXV9 152 aa13□□□□□ -0.33
CDKN3-204ENST00000442975 C1orf137Q5JT78 98 aa13□□□□□ -0.33
CDKN3-204ENST00000442975 SERTAD4-AS1Q5TG53 156 aa13□□□□□ -0.33
CDKN3-204ENST00000442975 F8VRH5 84 aa12.99□□□□□ -0.33
CDKN3-204ENST00000442975 SPINK8P0C7L1 97 aa12.99□□□□□ -0.33
CDKN3-204ENST00000442975 NDUFA6P56556 154 aa12.99□□□□□ -0.33
CDKN3-204ENST00000442975 PMCHL1Q16048 86 aa12.99□□□□□ -0.33
CDKN3-204ENST00000442975 URB1-AS1Q96HZ7 61 aa12.99□□□□□ -0.33
CDKN3-204ENST00000442975 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 A0A096LNJ9 63 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 HBDP02042 147 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 LINC00614P0C842 121 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 CXCL5P42830 114 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
CDKN3-204ENST00000442975 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
CDKN3-204ENST00000442975 UBE2BP63146 152 aa12.97□□□□□ -0.33
CDKN3-204ENST00000442975 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
CDKN3-204ENST00000442975 REG3GQ6UW15 175 aa12.97□□□□□ -0.33
CDKN3-204ENST00000442975 TNXBP22105 4242 aa12.96□□□□□ -0.33
CDKN3-204ENST00000442975 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
CDKN3-204ENST00000442975 XAGE1AQ9HD64 81 aa12.96□□□□□ -0.33
CDKN3-204ENST00000442975 H3BRM9 83 aa12.95□□□□□ -0.34
CDKN3-204ENST00000442975 RAB5BP61020 215 aa12.95□□□□□ -0.34
CDKN3-204ENST00000442975 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDKN3-204ENST00000442975 KRTAP11-1Q8IUC1 163 aa12.94□□□□□ -0.34
CDKN3-204ENST00000442975 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
CDKN3-204ENST00000442975 LINC01600Q96MT4 127 aa12.93□□□□□ -0.34
CDKN3-204ENST00000442975 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
CDKN3-204ENST00000442975 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
CDKN3-204ENST00000442975 IGLC3P0DOY3 106 aa12.92□□□□□ -0.34
CDKN3-204ENST00000442975 ATP5LO75964 103 aa12.9□□□□□ -0.34
CDKN3-204ENST00000442975 IGLV7-43P04211 117 aa12.9□□□□□ -0.34
CDKN3-204ENST00000442975 ZNF22P17026 224 aaPredicted RBP12.88□□□□□ -0.35
CDKN3-204ENST00000442975 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
CDKN3-204ENST00000442975 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
CDKN3-204ENST00000442975 C11orf86A6NJI1 115 aa12.85□□□□□ -0.35
CDKN3-204ENST00000442975 DIRC1Q969H9 104 aa12.85□□□□□ -0.35
CDKN3-204ENST00000442975 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
CDKN3-204ENST00000442975 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
CDKN3-204ENST00000442975 ODF1Q14990 250 aa12.84□□□□□ -0.35
CDKN3-204ENST00000442975 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
CDKN3-204ENST00000442975 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
CDKN3-204ENST00000442975 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
CDKN3-204ENST00000442975 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
CDKN3-204ENST00000442975 PFN2P35080 140 aa12.81□□□□□ -0.36
CDKN3-204ENST00000442975 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
CDKN3-204ENST00000442975 H0Y9J4 135 aa12.8□□□□□ -0.36
CDKN3-204ENST00000442975 HSBP1O75506 76 aa12.8□□□□□ -0.36
CDKN3-204ENST00000442975 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
CDKN3-204ENST00000442975 TRGC2P03986 189 aa12.79□□□□□ -0.36
CDKN3-204ENST00000442975 KRTAP10-8P60410 259 aa12.79□□□□□ -0.36
CDKN3-204ENST00000442975 TP73-AS1Q9UF72 201 aa12.79□□□□□ -0.36
CDKN3-204ENST00000442975 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
CDKN3-204ENST00000442975 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
CDKN3-204ENST00000442975 NKAPP1Q8N9T2 125 aa12.77□□□□□ -0.37
CDKN3-204ENST00000442975 ZNF625Q96I27 306 aaPredicted RBP12.77□□□□□ -0.37
CDKN3-204ENST00000442975 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
CDKN3-204ENST00000442975 NUPR1O60356 82 aa12.76□□□□□ -0.37
CDKN3-204ENST00000442975 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
CDKN3-204ENST00000442975 RPL37AP8A6NKH3 93 aa12.75□□□□□ -0.37
CDKN3-204ENST00000442975 H0Y8G0 127 aa12.75□□□□□ -0.37
CDKN3-204ENST00000442975 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
CDKN3-204ENST00000442975 UBR4Q5T4S7 5183 aa12.74□□□□□ -0.37
CDKN3-204ENST00000442975 SERF1AO75920 110 aa12.73□□□□□ -0.37
CDKN3-204ENST00000442975 PRR26Q8N8Z3 221 aa12.73□□□□□ -0.37
CDKN3-204ENST00000442975 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
CDKN3-204ENST00000442975 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
CDKN3-204ENST00000442975 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
CDKN3-204ENST00000442975 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
CDKN3-204ENST00000442975 ZNF861PO60384 105 aa12.71□□□□□ -0.37
CDKN3-204ENST00000442975 BCE1O60756 84 aa12.7□□□□□ -0.38
CDKN3-204ENST00000442975 SCO1O75880 301 aa12.7□□□□□ -0.38
CDKN3-204ENST00000442975 LEPROTL1O95214 131 aa12.69□□□□□ -0.38
CDKN3-204ENST00000442975 LINC00310P59036 64 aa12.69□□□□□ -0.38
CDKN3-204ENST00000442975 COX17Q14061 63 aa12.69□□□□□ -0.38
CDKN3-204ENST00000442975 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
CDKN3-204ENST00000442975 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
CDKN3-204ENST00000442975 COLCA2A8K830 154 aa12.67□□□□□ -0.38
CDKN3-204ENST00000442975 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
CDKN3-204ENST00000442975 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
CDKN3-204ENST00000442975 LINC00158P58513 81 aa12.67□□□□□ -0.38
CDKN3-204ENST00000442975 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
CDKN3-204ENST00000442975 IGLV1-50A0A075B6I6 118 aa12.65□□□□□ -0.38
CDKN3-204ENST00000442975 VPREB1P12018 145 aa12.65□□□□□ -0.38
CDKN3-204ENST00000442975 RPL24P83731 157 aaKnown RBP12.65□□□□□ -0.38
CDKN3-204ENST00000442975 FABP4P15090 132 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms