RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 UMAD1C9J7I0 102 aa5.27□□□□□ -1.57
SMPD4-208ENST00000439029 TCAPO15273 167 aa5.27□□□□□ -1.57
SMPD4-208ENST00000439029 Q8N377 158 aa5.27□□□□□ -1.57
SMPD4-208ENST00000439029 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
SMPD4-208ENST00000439029 A0A1B0GUT8 65 aa5.26□□□□□ -1.57
SMPD4-208ENST00000439029 A8MWL6 223 aa5.26□□□□□ -1.57
SMPD4-208ENST00000439029 RAB5BP61020 215 aa5.26□□□□□ -1.57
SMPD4-208ENST00000439029 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 F8VRH5 84 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 M0R378 163 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 PDE6DO43924 150 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 Q6ZN92 141 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 Q8IZM0 81 aa5.25□□□□□ -1.57
SMPD4-208ENST00000439029 IGLV4-3A0A075B6K6 122 aa5.24□□□□□ -1.57
SMPD4-208ENST00000439029 HIGD1CA8MV81 97 aa5.24□□□□□ -1.57
SMPD4-208ENST00000439029 SMLR1H3BR10 107 aa5.24□□□□□ -1.57
SMPD4-208ENST00000439029 PPP1R2P9O14990 202 aa5.24□□□□□ -1.57
SMPD4-208ENST00000439029 PPP1R17O96001 155 aa5.24□□□□□ -1.57
SMPD4-208ENST00000439029 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
SMPD4-208ENST00000439029 SLC25A20O43772 301 aa5.23□□□□□ -1.57
SMPD4-208ENST00000439029 IFI27P40305 119 aaPredicted RBP5.23□□□□□ -1.57
SMPD4-208ENST00000439029 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
SMPD4-208ENST00000439029 FAM19A2Q8N3H0 131 aa5.23□□□□□ -1.57
SMPD4-208ENST00000439029 FAM231DQ6ZW35 169 aa5.22□□□□□ -1.57
SMPD4-208ENST00000439029 TMEM141Q96I45 108 aa5.22□□□□□ -1.57
SMPD4-208ENST00000439029 SMIM2Q9BVW6 85 aa5.22□□□□□ -1.57
SMPD4-208ENST00000439029 GNB1LQ9BYB4 327 aa5.22□□□□□ -1.57
SMPD4-208ENST00000439029 NEBP20929 6669 aa5.22□□□□□ -1.57
SMPD4-208ENST00000439029 MOBPQ13875 183 aa5.21□□□□□ -1.58
SMPD4-208ENST00000439029 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
SMPD4-208ENST00000439029 C20orf78Q9BR46 151 aa5.21□□□□□ -1.58
SMPD4-208ENST00000439029 EIF5A2Q9GZV4 153 aaKnown RBP5.21□□□□□ -1.58
SMPD4-208ENST00000439029 IGLV9-49A0A0B4J1Y8 123 aa5.2□□□□□ -1.58
SMPD4-208ENST00000439029 CFC1P0CG37 223 aa5.2□□□□□ -1.58
SMPD4-208ENST00000439029 CKS2P33552 79 aa5.2□□□□□ -1.58
SMPD4-208ENST00000439029 RIGQ13278 110 aa5.2□□□□□ -1.58
SMPD4-208ENST00000439029 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
SMPD4-208ENST00000439029 CT83Q5H943 113 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 FAM104BQ5XKR9 115 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 Q6Q795 121 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 LINC00299Q6ZSB3 139 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 C2orf88Q9BSF0 95 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
SMPD4-208ENST00000439029 ZNF706Q9Y5V0 76 aaPredicted RBP5.19□□□□□ -1.58
SMPD4-208ENST00000439029 TRBV24-1A0A075B6N3 115 aa5.18□□□□□ -1.58
SMPD4-208ENST00000439029 NPYP01303 97 aa5.18□□□□□ -1.58
SMPD4-208ENST00000439029 PYGO1Q9Y3Y4 419 aa5.18□□□□□ -1.58
SMPD4-208ENST00000439029 D6R8Y8 96 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 TEX46H3BTG2 121 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 VPREB1P12018 145 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 RAB5AP20339 215 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 CEBPGP53567 150 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 GAGE2AQ6NT46 116 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 Q8NDZ9 215 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 VCX2Q9H322 139 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 BATF3Q9NR55 127 aa5.17□□□□□ -1.58
SMPD4-208ENST00000439029 KANTRA0A1W2PQU2 76 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 PFN2P35080 140 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 CXCL5P42830 114 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 RAB14P61106 215 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
SMPD4-208ENST00000439029 SMCR5Q8TEV8 140 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 TIMM17AQ99595 171 aa5.16□□□□□ -1.58
SMPD4-208ENST00000439029 LINC00862A6NCI5 91 aa5.15□□□□□ -1.59
SMPD4-208ENST00000439029 C2orf66Q6UXQ4 117 aa5.15□□□□□ -1.59
SMPD4-208ENST00000439029 AMELXQ99217 191 aa5.15□□□□□ -1.59
SMPD4-208ENST00000439029 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
SMPD4-208ENST00000439029 NDUFA13Q9P0J0 144 aa5.15□□□□□ -1.59
SMPD4-208ENST00000439029 LOC389332A0A1B0GUA5 103 aa5.14□□□□□ -1.59
SMPD4-208ENST00000439029 ZNF345Q14585 488 aa5.14□□□□□ -1.59
SMPD4-208ENST00000439029 AKAP14Q86UN6 197 aa5.14□□□□□ -1.59
SMPD4-208ENST00000439029 SMIM1B2RUZ4 78 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 NPSP0C0P6 89 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 HERVK_113P63121 156 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 LINC01551Q86U37 167 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
SMPD4-208ENST00000439029 LINC00483Q53H64 154 aa5.12□□□□□ -1.59
SMPD4-208ENST00000439029 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
SMPD4-208ENST00000439029 V9GYV3 84 aa5.12□□□□□ -1.59
SMPD4-208ENST00000439029 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
SMPD4-208ENST00000439029 SPINK8P0C7L1 97 aa5.11□□□□□ -1.59
SMPD4-208ENST00000439029 RPL24P83731 157 aaKnown RBP5.11□□□□□ -1.59
SMPD4-208ENST00000439029 OSTCQ9NRP0 149 aa5.11□□□□□ -1.59
SMPD4-208ENST00000439029 NAT8BQ9UHF3 227 aa5.11□□□□□ -1.59
SMPD4-208ENST00000439029 CYSLTR1Q9Y271 337 aa5.11□□□□□ -1.59
SMPD4-208ENST00000439029 PDZD11Q5EBL8 140 aa5.1□□□□□ -1.59
SMPD4-208ENST00000439029 C9orf153Q5TBE3 101 aa5.1□□□□□ -1.59
SMPD4-208ENST00000439029 MRPL54Q6P161 138 aaKnown RBP5.1□□□□□ -1.59
SMPD4-208ENST00000439029 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
SMPD4-208ENST00000439029 IGIPA6NJ69 53 aa5.09□□□□□ -1.59
SMPD4-208ENST00000439029 ATP5LO75964 103 aa5.09□□□□□ -1.59
SMPD4-208ENST00000439029 ERC2-IT1O76042 136 aa5.09□□□□□ -1.59
SMPD4-208ENST00000439029 MT2AP02795 61 aa5.09□□□□□ -1.59
SMPD4-208ENST00000439029 TMEM250H0YL14 139 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 TAGLN2P37802 199 aaKnown RBP5.08□□□□□ -1.6
SMPD4-208ENST00000439029 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms