RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 TENM1Q9UKZ4 2725 aa17.2■□□□□ 0.34
LMBR1-209ENST00000434453 SMIM11BQ8TCY0 68 aa17.2■□□□□ 0.34
LMBR1-209ENST00000434453 CLPSL2Q6UWE3 100 aa17.19■□□□□ 0.34
LMBR1-209ENST00000434453 C11orf68Q9H3H3 251 aaKnown RBP17.19■□□□□ 0.34
LMBR1-209ENST00000434453 NHLRC4P0CG21 123 aaPredicted RBP17.19■□□□□ 0.34
LMBR1-209ENST00000434453 Q6Q795 121 aa17.19■□□□□ 0.34
LMBR1-209ENST00000434453 TRAV26-1A0A087WT03 109 aa17.18■□□□□ 0.34
LMBR1-209ENST00000434453 ANAPC13Q9BS18 74 aa17.18■□□□□ 0.34
LMBR1-209ENST00000434453 Q9HAA7 133 aa17.17■□□□□ 0.34
LMBR1-209ENST00000434453 MRPL23Q16540 153 aaKnown RBP17.17■□□□□ 0.34
LMBR1-209ENST00000434453 C6orf226Q5I0X4 101 aa17.16■□□□□ 0.34
LMBR1-209ENST00000434453 HECTD1Q9ULT8 2610 aa17.16■□□□□ 0.34
LMBR1-209ENST00000434453 DEFB4AO15263 64 aa17.16■□□□□ 0.34
LMBR1-209ENST00000434453 SS18Q15532 418 aa17.16■□□□□ 0.34
LMBR1-209ENST00000434453 PAX4O43316 350 aa17.15■□□□□ 0.34
LMBR1-209ENST00000434453 NOTCH2Q04721 2471 aa17.15■□□□□ 0.34
LMBR1-209ENST00000434453 DEFB135Q30KP9 77 aa17.15■□□□□ 0.34
LMBR1-209ENST00000434453 NDUFV3P56181 108 aaKnown RBP17.14■□□□□ 0.33
LMBR1-209ENST00000434453 NSD1Q96L73 2696 aaPredicted RBP17.14■□□□□ 0.33
LMBR1-209ENST00000434453 A0A087WYN8 130 aa17.13■□□□□ 0.33
LMBR1-209ENST00000434453 LYRM9A8MSI8 78 aa17.13■□□□□ 0.33
LMBR1-209ENST00000434453 Q8IZM0 81 aa17.13■□□□□ 0.33
LMBR1-209ENST00000434453 Q8N3U1 123 aa17.13■□□□□ 0.33
LMBR1-209ENST00000434453 C9orf66Q5T8R8 295 aa17.12■□□□□ 0.33
LMBR1-209ENST00000434453 LINC00269Q8N2A0 174 aa17.09■□□□□ 0.33
LMBR1-209ENST00000434453 SMCR5Q8TEV8 140 aa17.09■□□□□ 0.33
LMBR1-209ENST00000434453 ACYP1P07311 99 aa17.08■□□□□ 0.33
LMBR1-209ENST00000434453 MALP21145 153 aa17.08■□□□□ 0.33
LMBR1-209ENST00000434453 LINC01561Q8N1V8 128 aa17.08■□□□□ 0.33
LMBR1-209ENST00000434453 IGHV4-28A0A0C4DH34 117 aa17.08■□□□□ 0.32
LMBR1-209ENST00000434453 KIAA0087Q14695 138 aa17.08■□□□□ 0.32
LMBR1-209ENST00000434453 INAFM1C9JVW0 142 aa17.07■□□□□ 0.32
LMBR1-209ENST00000434453 CELA1Q9UNI1 258 aa17.06■□□□□ 0.32
LMBR1-209ENST00000434453 ATP5G1P05496 136 aa17.05■□□□□ 0.32
LMBR1-209ENST00000434453 TRBV7-7A0A0K0K1E9 115 aa17.05■□□□□ 0.32
LMBR1-209ENST00000434453 H0YGX0 51 aa17.05■□□□□ 0.32
LMBR1-209ENST00000434453 CD164L2Q6UWJ8 174 aa17.05■□□□□ 0.32
LMBR1-209ENST00000434453 TRRAPQ9Y4A5 3859 aa17.05■□□□□ 0.32
LMBR1-209ENST00000434453 C9orf129Q5T035 196 aaKnown RBP17.04■□□□□ 0.32
LMBR1-209ENST00000434453 SDIM1Q6ZPB5 146 aa17.04■□□□□ 0.32
LMBR1-209ENST00000434453 OR13C6PQ8NH95 151 aa17.04■□□□□ 0.32
LMBR1-209ENST00000434453 CHCHD10Q8WYQ3 142 aaPredicted RBP17.04■□□□□ 0.32
LMBR1-209ENST00000434453 Q8NAQ8 132 aa17.03■□□□□ 0.32
LMBR1-209ENST00000434453 IGLV10-54A0A075B6I4 117 aa17.02■□□□□ 0.32
LMBR1-209ENST00000434453 ATRQ13535 2644 aa17.02■□□□□ 0.32
LMBR1-209ENST00000434453 DAD1P61803 113 aa17.02■□□□□ 0.32
LMBR1-209ENST00000434453 APOC4P55056 127 aa17.01■□□□□ 0.31
LMBR1-209ENST00000434453 DNAL4O96015 105 aa17.01■□□□□ 0.31
LMBR1-209ENST00000434453 ANGP03950 147 aaKnown RBP17.01■□□□□ 0.31
LMBR1-209ENST00000434453 REG3AQ06141 175 aa17.01■□□□□ 0.31
LMBR1-209ENST00000434453 LECT2O14960 151 aa17■□□□□ 0.31
LMBR1-209ENST00000434453 INAFM2P0DMQ5 153 aa17■□□□□ 0.31
LMBR1-209ENST00000434453 PRR3P79522 188 aaKnown RBP17■□□□□ 0.31
LMBR1-209ENST00000434453 NANOS2P60321 138 aaKnown RBP16.99■□□□□ 0.31
LMBR1-209ENST00000434453 TEP1Q99973 2627 aaKnown RBP16.98■□□□□ 0.31
LMBR1-209ENST00000434453 C9orf116Q5BN46 136 aaPredicted RBP16.96■□□□□ 0.31
LMBR1-209ENST00000434453 OBSCN-AS1Q96MR7 158 aa16.96■□□□□ 0.31
LMBR1-209ENST00000434453 LINC00643Q86TS7 51 aa16.96■□□□□ 0.3
LMBR1-209ENST00000434453 HIVEP1P15822 2718 aa16.96■□□□□ 0.3
LMBR1-209ENST00000434453 SLPIP03973 132 aa16.94■□□□□ 0.3
LMBR1-209ENST00000434453 GAGE2AQ6NT46 116 aa16.94■□□□□ 0.3
LMBR1-209ENST00000434453 MIFP14174 115 aa16.94■□□□□ 0.3
LMBR1-209ENST00000434453 COX17Q14061 63 aa16.94■□□□□ 0.3
LMBR1-209ENST00000434453 CFAP161Q6P656 301 aa16.94■□□□□ 0.3
LMBR1-209ENST00000434453 CCDC179H3BU77 68 aa16.93■□□□□ 0.3
LMBR1-209ENST00000434453 CXCL5P42830 114 aa16.93■□□□□ 0.3
LMBR1-209ENST00000434453 Q8NDZ9 215 aa16.93■□□□□ 0.3
LMBR1-209ENST00000434453 IMUPQ9GZP8 106 aa16.92■□□□□ 0.3
LMBR1-209ENST00000434453 C14orf132Q9NPU4 83 aa16.92■□□□□ 0.3
LMBR1-209ENST00000434453 NDUFC2O95298 119 aa16.91■□□□□ 0.3
LMBR1-209ENST00000434453 HTN3P15516 51 aa16.9■□□□□ 0.3
LMBR1-209ENST00000434453 B5MCH6 92 aa16.89■□□□□ 0.29
LMBR1-209ENST00000434453 SPART-AS1P0CW21 52 aa16.89■□□□□ 0.29
LMBR1-209ENST00000434453 C10orf25Q5T742 122 aa16.88■□□□□ 0.29
LMBR1-209ENST00000434453 LELP1Q5T871 98 aa16.88■□□□□ 0.29
LMBR1-209ENST00000434453 IGHV4-30-4P0DP06 118 aa16.88■□□□□ 0.29
LMBR1-209ENST00000434453 NCR3O14931 201 aa16.87■□□□□ 0.29
LMBR1-209ENST00000434453 C6orf223Q8N319 242 aa16.87■□□□□ 0.29
LMBR1-209ENST00000434453 LINC00167Q96N53 147 aa16.86■□□□□ 0.29
LMBR1-209ENST00000434453 KLK5Q9Y337 293 aaPredicted RBP16.86■□□□□ 0.29
LMBR1-209ENST00000434453 WFDC9Q8NEX5 89 aa16.85■□□□□ 0.29
LMBR1-209ENST00000434453 UNQ6190/PRO20217Q6UXQ8 127 aa16.85■□□□□ 0.29
LMBR1-209ENST00000434453 LINC00526Q96FQ7 95 aa16.85■□□□□ 0.29
LMBR1-209ENST00000434453 PRR34Q9NV39 138 aa16.85■□□□□ 0.29
LMBR1-209ENST00000434453 ORMDL1Q9P0S3 153 aa16.85■□□□□ 0.29
LMBR1-209ENST00000434453 FAM236AA0A1B0GUQ0 79 aa16.84■□□□□ 0.29
LMBR1-209ENST00000434453 FAM236BA0A1B0GV22 79 aa16.84■□□□□ 0.29
LMBR1-209ENST00000434453 TMEM126AQ9H061 195 aa16.84■□□□□ 0.29
LMBR1-209ENST00000434453 WIPF1O43516 503 aa16.82■□□□□ 0.28
LMBR1-209ENST00000434453 Q8N814 137 aa16.82■□□□□ 0.28
LMBR1-209ENST00000434453 SPAG11BQ08648 103 aa16.82■□□□□ 0.28
LMBR1-209ENST00000434453 KLK12Q9UKR0 248 aa16.82■□□□□ 0.28
LMBR1-209ENST00000434453 ENHOQ6UWT2 76 aa16.81■□□□□ 0.28
LMBR1-209ENST00000434453 SS18L2Q9UHA2 77 aa16.8■□□□□ 0.28
LMBR1-209ENST00000434453 A0A1B0GX51 115 aa16.79■□□□□ 0.28
LMBR1-209ENST00000434453 CYSRT1A8MQ03 144 aa16.79■□□□□ 0.28
LMBR1-209ENST00000434453 LINC00846Q9NV44 126 aa16.78■□□□□ 0.28
LMBR1-209ENST00000434453 A0A0J9YWU9 116 aa16.77■□□□□ 0.28
LMBR1-209ENST00000434453 C6orf99Q4VX62 202 aa16.77■□□□□ 0.27
LMBR1-209ENST00000434453 LYPD5Q6UWN5 251 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms