RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 F8VRH5 84 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 SNHG12Q9BXW3 62 aa3.03□□□□□ -1.92
UBE4A-202ENST00000431736 FABP2P12104 132 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 ENHOQ6UWT2 76 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 LAMTOR3Q9UHA4 124 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 IGLV4-60A0A075B6I1 120 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 CHTF8P0CG12 524 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 SMIM6P0DI80 62 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 ATOH7Q8N100 152 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 MRPL35Q9NZE8 188 aaKnown RBP3.02□□□□□ -1.93
UBE4A-202ENST00000431736 SEC61GP60059 68 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 PMCHL2Q9BQD1 86 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 FOXI1Q12951 378 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 GTF2H5Q6ZYL4 71 aa3.02□□□□□ -1.93
UBE4A-202ENST00000431736 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 SPATA45Q537H7 98 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 CDC42SE2Q9NRR3 84 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 NDUFC2-KCTD14E9PQ53 114 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 SPAG11AQ6PDA7 123 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 MRPL52Q86TS9 123 aaKnown RBP3.01□□□□□ -1.93
UBE4A-202ENST00000431736 KRTAP1-5Q9BYS1 174 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 SPINK8P0C7L1 97 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 SCGB1A1P11684 91 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
UBE4A-202ENST00000431736 LIMD2Q9BT23 127 aa3.01□□□□□ -1.93
UBE4A-202ENST00000431736 MRPS36P82909 103 aaKnown RBP3□□□□□ -1.93
UBE4A-202ENST00000431736 C5orf47Q569G3 176 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 TGP01266 2768 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 SERF1AO75920 110 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 PKD1L1Q8TDX9 2849 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 A0A0J9YXV3 536 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
UBE4A-202ENST00000431736 TENM3Q9P273 2699 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 NPYP01303 97 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 CRIP1P50238 77 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
UBE4A-202ENST00000431736 CSMD2Q7Z408 3487 aa3□□□□□ -1.93
UBE4A-202ENST00000431736 A0A096LNI7 61 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 COX8CQ7Z4L0 72 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 LINC01561Q8N1V8 128 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 DAND5Q8N907 189 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 CSDC2Q9Y534 153 aaKnown RBP2.99□□□□□ -1.93
UBE4A-202ENST00000431736 Q8N3U1 123 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 PRO1933Q9H354 126 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 CELSR1Q9NYQ6 3014 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 Q8IZM0 81 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 PHF5AQ7RTV0 110 aaKnown RBP2.99□□□□□ -1.93
UBE4A-202ENST00000431736 TSHBP01222 138 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 RPL39P62891 51 aaKnown RBP2.99□□□□□ -1.93
UBE4A-202ENST00000431736 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
UBE4A-202ENST00000431736 CARHSP1Q9Y2V2 147 aaKnown RBP2.99□□□□□ -1.93
UBE4A-202ENST00000431736 ZC2HC1BQ5TFG8 222 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 IGLV7-43P04211 117 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
UBE4A-202ENST00000431736 UNQ6190/PRO20217Q6UXQ8 127 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 UQCR10Q9UDW1 63 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 PYGO1Q9Y3Y4 419 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 RPL37AP8A6NKH3 93 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 KRTAP29-1A8MX34 341 aaPredicted RBP2.98□□□□□ -1.93
UBE4A-202ENST00000431736 GAGE2AQ6NT46 116 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 M0R378 163 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 PLAC8Q9NZF1 115 aa2.98□□□□□ -1.93
UBE4A-202ENST00000431736 SMIM27A0A1W2PRY6 76 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 DLEU1O43261 78 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 IGKV2-28A0A075B6P5 120 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 TCL1BO95988 128 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 IGKV2D-28P01615 120 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 LINC00694P0DN24 101 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 SRSF3P84103 164 aaKnown RBP2.97□□□□□ -1.93
UBE4A-202ENST00000431736 TINCRA0A1B0GVN0 87 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 C22orf24Q9Y442 160 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 V9GYV3 84 aa2.97□□□□□ -1.93
UBE4A-202ENST00000431736 TRBV24-1A0A075B6N3 115 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 Q6ZRN7 208 aaPredicted RBP2.96□□□□□ -1.94
UBE4A-202ENST00000431736 IGLV9-49A0A0B4J1Y8 123 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 BCE1O60756 84 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 COX17Q14061 63 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 ATXN8Q156A1 80 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 NTM-AS1Q6ZSK4 140 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 SPACA4Q8TDM5 124 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 NCR3O14931 201 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 C14orf144Q96I85 54 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 PPDPFQ9H3Y8 114 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 TRAV13-2A0A0B4J235 113 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 ZNF861PO60384 105 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 POLR2KP53803 58 aaKnown RBP2.96□□□□□ -1.94
UBE4A-202ENST00000431736 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 LINC00173Q6ZV60 143 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 MTURNQ8N3F0 131 aa2.96□□□□□ -1.94
UBE4A-202ENST00000431736 CNFNQ9BYD5 112 aa2.95□□□□□ -1.94
UBE4A-202ENST00000431736 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.95□□□□□ -1.94
UBE4A-202ENST00000431736 IGLV4-3A0A075B6K6 122 aa2.95□□□□□ -1.94
UBE4A-202ENST00000431736 K7EN84 100 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms