RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CCKP06307 115 aa9.19□□□□□ -0.94
PTCH1-207ENST00000429896 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
PTCH1-207ENST00000429896 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
PTCH1-207ENST00000429896 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
PTCH1-207ENST00000429896 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
PTCH1-207ENST00000429896 X6R8D5 127 aa9.18□□□□□ -0.94
PTCH1-207ENST00000429896 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
PTCH1-207ENST00000429896 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
PTCH1-207ENST00000429896 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
PTCH1-207ENST00000429896 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
PTCH1-207ENST00000429896 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
PTCH1-207ENST00000429896 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
PTCH1-207ENST00000429896 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-207ENST00000429896 TRIAP1O43715 76 aa9.16□□□□□ -0.94
PTCH1-207ENST00000429896 LINC00308Q8TCZ7 52 aa9.16□□□□□ -0.94
PTCH1-207ENST00000429896 MTORP42345 2549 aa9.16□□□□□ -0.94
PTCH1-207ENST00000429896 K7EIL1 84 aa9.16□□□□□ -0.94
PTCH1-207ENST00000429896 H3BT86 120 aa9.15□□□□□ -0.94
PTCH1-207ENST00000429896 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
PTCH1-207ENST00000429896 A0A0C4DFX4 3053 aa9.15□□□□□ -0.94
PTCH1-207ENST00000429896 COL6A3P12111 3177 aa9.15□□□□□ -0.94
PTCH1-207ENST00000429896 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
PTCH1-207ENST00000429896 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
PTCH1-207ENST00000429896 TRIOO75962 3097 aa9.14□□□□□ -0.95
PTCH1-207ENST00000429896 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
PTCH1-207ENST00000429896 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
PTCH1-207ENST00000429896 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
PTCH1-207ENST00000429896 WWC2-AS2Q96NR7 200 aa9.13□□□□□ -0.95
PTCH1-207ENST00000429896 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
PTCH1-207ENST00000429896 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
PTCH1-207ENST00000429896 Q6ZSN1 163 aa9.12□□□□□ -0.95
PTCH1-207ENST00000429896 K7ERS5 55 aa9.12□□□□□ -0.95
PTCH1-207ENST00000429896 C9orf116Q5BN46 136 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-207ENST00000429896 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
PTCH1-207ENST00000429896 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
PTCH1-207ENST00000429896 Q6ZQY7 126 aa9.11□□□□□ -0.95
PTCH1-207ENST00000429896 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-207ENST00000429896 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
PTCH1-207ENST00000429896 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
PTCH1-207ENST00000429896 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
PTCH1-207ENST00000429896 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
PTCH1-207ENST00000429896 Q8NAQ8 132 aa9.1□□□□□ -0.95
PTCH1-207ENST00000429896 C19orf73Q9NVV2 129 aa9.1□□□□□ -0.95
PTCH1-207ENST00000429896 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
PTCH1-207ENST00000429896 IGLV4-69A0A075B6H9 119 aa9.09□□□□□ -0.95
PTCH1-207ENST00000429896 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
PTCH1-207ENST00000429896 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
PTCH1-207ENST00000429896 PDE6GP18545 87 aa9.09□□□□□ -0.95
PTCH1-207ENST00000429896 IGSF10Q6WRI0 2623 aa9.09□□□□□ -0.95
PTCH1-207ENST00000429896 IBA57-AS1B1ANH7 110 aa9.08□□□□□ -0.96
PTCH1-207ENST00000429896 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
PTCH1-207ENST00000429896 MGAQ8IWI9 3026 aa9.08□□□□□ -0.96
PTCH1-207ENST00000429896 Q6ZVQ6 151 aa9.08□□□□□ -0.96
PTCH1-207ENST00000429896 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
PTCH1-207ENST00000429896 DEFB116Q30KQ4 102 aa9.07□□□□□ -0.96
PTCH1-207ENST00000429896 H3BNG1 76 aa9.07□□□□□ -0.96
PTCH1-207ENST00000429896 SPINK1P00995 79 aa9.06□□□□□ -0.96
PTCH1-207ENST00000429896 A6NED7 52 aa9.06□□□□□ -0.96
PTCH1-207ENST00000429896 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
PTCH1-207ENST00000429896 ESRGQ1W209 222 aa9.05□□□□□ -0.96
PTCH1-207ENST00000429896 M0R378 163 aa9.05□□□□□ -0.96
PTCH1-207ENST00000429896 M0QXV9 152 aa9.05□□□□□ -0.96
PTCH1-207ENST00000429896 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
PTCH1-207ENST00000429896 PRR15LQ9BU68 103 aa9.05□□□□□ -0.96
PTCH1-207ENST00000429896 SORL1Q92673 2214 aa9.04□□□□□ -0.96
PTCH1-207ENST00000429896 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
PTCH1-207ENST00000429896 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
PTCH1-207ENST00000429896 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-207ENST00000429896 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
PTCH1-207ENST00000429896 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
PTCH1-207ENST00000429896 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
PTCH1-207ENST00000429896 A0A096LNJ9 63 aa9.03□□□□□ -0.96
PTCH1-207ENST00000429896 CYSRT1A8MQ03 144 aa9.03□□□□□ -0.96
PTCH1-207ENST00000429896 KIF25-AS1Q9Y6Z4 181 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 A0A1B0GUV1 79 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
PTCH1-207ENST00000429896 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
PTCH1-207ENST00000429896 COX6A2Q02221 97 aa9.01□□□□□ -0.97
PTCH1-207ENST00000429896 Q8N9L7 120 aa9.01□□□□□ -0.97
PTCH1-207ENST00000429896 DHRS4-AS1Q9P1J3 65 aa9.01□□□□□ -0.97
PTCH1-207ENST00000429896 SETD2Q9BYW2 2564 aaPredicted RBP9□□□□□ -0.97
PTCH1-207ENST00000429896 IGIPA6NJ69 53 aa9□□□□□ -0.97
PTCH1-207ENST00000429896 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
PTCH1-207ENST00000429896 DSPP15924 2871 aaKnown RBP9□□□□□ -0.97
PTCH1-207ENST00000429896 ZNF73O43830 326 aaPredicted RBP9□□□□□ -0.97
PTCH1-207ENST00000429896 CR1P17927 2039 aa9□□□□□ -0.97
PTCH1-207ENST00000429896 A8MTW9 85 aa9□□□□□ -0.97
PTCH1-207ENST00000429896 CFAP46Q8IYW2 2715 aa9□□□□□ -0.97
PTCH1-207ENST00000429896 C1orf137Q5JT78 98 aa9□□□□□ -0.97
PTCH1-207ENST00000429896 FAM240AA0A1B0GVK7 77 aa8.99□□□□□ -0.97
PTCH1-207ENST00000429896 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
PTCH1-207ENST00000429896 WDFY4Q6ZS81 3184 aa8.99□□□□□ -0.97
PTCH1-207ENST00000429896 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
PTCH1-207ENST00000429896 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
PTCH1-207ENST00000429896 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
PTCH1-207ENST00000429896 Q8IZM0 81 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms